RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 CPSF4LA6NMK7 179 aaKnown RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 C5orf58C9J3I9 102 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 PRR23D1E9PI22 279 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 POLR3GO15318 223 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 ZSCAN12O43309 604 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 GMDSO60547 372 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 LYPD3O95274 346 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 SNRNP70P08621 437 aaKnown RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 ABHD2P08910 425 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 FAM153BP0C7A2 387 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 PRR23D2P0DMB1 279 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 ETS2P15036 469 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 NDUFB7P17568 137 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 AZGP1P25311 298 aaKnown RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 POU1F1P28069 291 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 CCT5P48643 541 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 DYNLT3P51808 116 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 NME5P56597 212 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 GNG11P61952 73 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 LRRC74AQ0VAA2 488 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 SSX2Q16385 188 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 DGUOKQ16854 277 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 GTDC1Q4AE62 458 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 CCDC92Q53HC0 331 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 OTPQ5XKR4 325 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 TTC33Q6PID6 262 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 C16orf89Q6UX73 402 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 LCNL1Q6ZST4 164 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 FAM185AQ8N0U4 392 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 OSR2Q8N2R0 312 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 SLC26A10Q8NG04 563 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 OR9Q1Q8NGQ5 310 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 VPS33AQ96AX1 596 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 C12orf43Q96C57 262 aaKnown RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 SEH1LQ96EE3 360 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 RAX2Q96IS3 184 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 FMO2Q99518 471 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 MCHR1Q99705 422 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 RSRP1Q9BUV0 290 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 TXNIPQ9H3M7 391 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 TPT1P8Q9HAU6 139 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 ELL3Q9HB65 397 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 SLC25A10Q9UBX3 287 aaPredicted RBP5.1□□□□□ -1.59
CD44-237ENST00000534082 IGLV1-36A0A0B4J1U3 117 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 SH2D7A6NKC9 451 aaPredicted RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 M0R3H8 397 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 CCL24O00175 119 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 COPEO14579 308 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ANP32DO95626 131 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 TFF1P04155 84 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ALDH3A1P30838 453 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 GGT2P36268 569 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 CAV3P56539 151 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ERVFRD-1P60508 538 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 UFM1P61960 85 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 MALLQ13021 153 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 MPP2Q14168 576 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ZNF260Q3ZCT1 412 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ATPAF1Q5TC12 328 aaPredicted RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 PGAP1Q75T13 922 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 MRPL21Q7Z2W9 205 aaKnown RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 ZNF329Q86UD4 541 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 KRT73Q86Y46 540 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ARMC8Q8IUR7 673 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 RPP25LQ8N5L8 163 aaKnown RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 OR5T2Q8NGG2 359 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 OR4Q3Q8NH05 313 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 OR5K1Q8NHB7 308 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 NFKBIDQ8NI38 313 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 LRRC8CQ8TDW0 803 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 CAPSLQ8WWF8 208 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 SLCO4A1Q96BD0 722 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 AKR1E2Q96JD6 320 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ZIM3Q96PE6 472 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 GAFA1Q96PS6 74 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ARPC5LQ9BPX5 153 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 SPATA25Q9BR10 227 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ZNF426Q9BUY5 554 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 SPATA5L1Q9BVQ7 753 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 TSPYL1Q9H0U9 437 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 RAD21L1Q9H4I0 556 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 RNPEPL1Q9HAU8 725 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 MEPEQ9NQ76 525 aaPredicted RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 ZFP57Q9NU63 452 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ADA2Q9NZK5 511 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 ZNF391Q9UJN7 358 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 SLC7A7Q9UM01 511 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 TBL2Q9Y4P3 447 aaKnown RBP5.09□□□□□ -1.59
CD44-237ENST00000534082 LYVE1Q9Y5Y7 322 aa5.09□□□□□ -1.59
CD44-237ENST00000534082 PRORSD1PA6NEY8 169 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 TRIM64CA6NLI5 447 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 CD300LBA8K4G0 201 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 H7C1C5 153 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 RER1O15258 196 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 SIGLEC5O15389 551 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms