RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 APOL3O95236 402 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 CYB5R3P00387 301 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-227ENST00000533909 MSMBP08118 114 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 ANOS1P23352 680 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 DCTDP32321 178 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
CAPN1-227ENST00000533909 CD200P41217 278 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 LMO4P61968 165 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 ROM1Q03395 351 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 BCL2L15Q5TBC7 163 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 PRAMEF6Q5VXH4 476 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 MEDAGQ5VYS4 303 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 FAM220AQ7Z4H9 259 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 YIPF7Q8N8F6 280 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 DVL3Q92997 716 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-227ENST00000533909 HIST1H2AAQ96QV6 131 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 APOL4Q9BPW4 351 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 TMEM160Q9NX00 188 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 DYSFO75923 2080 aa11.29□□□□□ -0.6
CAPN1-227ENST00000533909 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 hCG_38984A0A1B0GV85 526 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 FAM157AC9JC47 383 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 LOC110117498-PIK3R3F6TDL0 507 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 MPZL2O60487 215 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 ENTPD6O75354 484 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 IFNA2P01563 188 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 GRPP07492 148 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 OR2T7P0C7T2 308 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 GATA4P43694 442 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 MTNR1AP48039 350 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 DVL1P1P54792 670 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 SNRPGP62308 76 aaKnown RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 IL5RAQ01344 420 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 GABPB1Q06547 395 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 EGR3Q06889 387 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 RCN1Q15293 331 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 ZMYND11Q15326 602 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 PRSS45Q7RTY3 260 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 THAP5Q7Z6K1 395 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 BOLLQ8N9W6 283 aaKnown RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 OR8B12Q8NGG6 310 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 OR2T27Q8NH04 317 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 TMEM186Q96B77 213 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 C1orf159Q96HA4 380 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 Q96MT0 163 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 MICU1Q9BPX6 476 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 PBOV1Q9GZY1 135 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 HIF1ANQ9NWT6 349 aa11.28□□□□□ -0.6
CAPN1-227ENST00000533909 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
CAPN1-227ENST00000533909 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 A0A0U1RQV5 110 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 FAM20BO75063 409 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 MTRF1O75570 445 aaKnown RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RPP14O95059 124 aaKnown RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ZNF205O95201 554 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 SRD5A1P18405 259 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 MAP2K3P46734 347 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ACTC1P68032 377 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ACTA1P68133 377 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 MAB21L1Q13394 359 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 LRRC36Q1X8D7 754 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 CR1LQ2VPA4 569 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 PLEKHG7Q6ZR37 379 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 KCTD8Q6ZWB6 473 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 LRRC28Q86X40 367 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 GALNT4Q8N4A0 578 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RFLNBQ8N5W9 214 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 UBE2FQ969M7 185 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 FAM71F1Q96KD3 344 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RTL8AQ9BWD3 113 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 C1orf123Q9NWV4 160 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 FAM206AQ9NX38 181 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 SMPD3Q9NY59 655 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RNF7Q9UBF6 113 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 RHBDD3Q9Y3P4 386 aa11.27□□□□□ -0.61
CAPN1-227ENST00000533909 ATRQ13535 2644 aa11.26□□□□□ -0.61
CAPN1-227ENST00000533909 PPIAL4EA0A075B759 164 aa11.26□□□□□ -0.61
CAPN1-227ENST00000533909 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
CAPN1-227ENST00000533909 A0A0X1KG70 313 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms