RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 BTAF1O14981 1849 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 IGHV3-20A0A0C4DH32 117 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF816-ZNF321PA0A0X1KG74 233 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF727A8MUV8 499 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ARPC3O15145 178 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 NME2P1O60361 137 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 LRP3O75074 770 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 CBR3O75828 277 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 CT45A10P0DMU9 189 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ATF1P18846 271 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 EMDP50402 254 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SNRPNP63162 240 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 BTG2P78543 158 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 DEGS2Q6QHC5 323 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 KIRREL2Q6UWL6 708 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SLC24A4Q8NFF2 622 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 BPIFCQ8NFQ6 507 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 OTOSQ8NHW6 89 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 IFI44Q8TCB0 444 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 CXorf58Q96LI9 332 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 FAM234AQ9H0X4 552 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SLCO1C1Q9NYB5 712 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RREB1Q92766 1687 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 NKX2-2O95096 273 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ACSM4P0C7M7 580 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SDHBP21912 280 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 C21orf58P58505 322 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 TAS2R60P59551 318 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 BPIFB3P59826 476 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RIPPLY2Q5TAB7 128 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ABI3BPQ7Z7G0 1075 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 NOXO1Q8NFA2 376 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 NUDCD2Q8WVJ2 157 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RTN4IP1Q8WWV3 396 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 LHX4Q969G2 390 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 MRGPRX1Q96LB2 322 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 DOK1Q99704 481 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 OR51I2Q9H344 312 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 UBE2ZQ9H832 354 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RYDENQ9NUL5 291 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RNF24Q9Y225 148 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 MYO5AQ9Y4I1 1855 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 A0A0B4J2E0 115 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 A0A1B0GX12 115 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 H0Y8X5 98 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ABCD4O14678 606 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 PLPP2O43688 288 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 TXNDC12O95881 172 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 CYC1P08574 325 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RAB7AP51149 207 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 UBE2IP63279 158 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 B4GALNT1Q00973 533 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 TLE1Q04724 770 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF787Q6DD87 383 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 YRDCQ86U90 279 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 THNSL2Q86YJ6 484 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 OSR2Q8N2R0 312 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 OR13C5Q8NGS8 318 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 MARCH1Q8TCQ1 289 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 PINX1Q96BK5 328 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF764Q96H86 408 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 C12orf49Q9H741 205 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ISG20L2Q9H9L3 353 aaKnown RBP6.33□□□□□ -1.4
CTNND1-236ENST00000533667 TBX21Q9UL17 535 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 NDUFB6O95139 128 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SRFP11831 508 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 GNG10P50151 68 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 MPPED2Q15777 294 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 VWA2Q5GFL6 755 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 TEX261Q6UWH6 196 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 Q8IYB0 196 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 CARFQ8N187 725 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF687Q8N1G0 1237 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF355PQ9NSJ1 428 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 SLC22A13Q9Y226 551 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 U3KQ87 197 aa6.33□□□□□ -1.4
CTNND1-236ENST00000533667 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 GALR2O43603 387 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 GP1BAP07359 652 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SPP1P10451 314 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 FPR2P25090 351 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ABCD3P28288 659 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 DCTDP32321 178 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PIGPP57054 158 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ERHP84090 104 aaKnown RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SMAD4Q13485 552 aaKnown RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SPANXN5Q5MJ07 72 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 FBXL6Q8N531 539 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR5AP2Q8NGF4 316 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PPP1R1CQ8WVI7 109 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 NTNG2Q96CW9 530 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 TRAF4Q9BUZ4 470 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PLA2G12AQ9BZM1 189 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 TINAGL1Q9GZM7 467 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms