RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PRRT1Q99946 306 aa13.49□□□□□ -0.25
CACNA1E-208ENST00000533229 RBM24Q9BX46 236 aaKnown RBP13.49□□□□□ -0.25
CACNA1E-208ENST00000533229 FOXD3Q9UJU5 478 aaPredicted RBP13.49□□□□□ -0.25
CACNA1E-208ENST00000533229 PMS2P1A4D2B8 440 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 EIF1BO60739 113 aaKnown RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 RAD51DO75771 328 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 PMP2P02689 132 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 DBHP09172 617 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 C4BPBP20851 252 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 MPZP25189 248 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 FOLR3P41439 243 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 GSK3AP49840 483 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 ZNF133P52736 654 aaPredicted RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 RAB14P61106 215 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 PPP1R1AQ13522 171 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 SLC25A42Q86VD7 318 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 OR5D18Q8NGL1 313 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 NPRL2Q8WTW4 380 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 WBP1Q96G27 269 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 TMEM41AQ96HV5 264 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 CCSO14618 274 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 DHHO43323 396 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 CBR3O75828 277 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 STK17BO94768 372 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 CHRM2P08172 466 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 ZBTB25P24278 435 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 RAC1P63000 192 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 AANATQ16613 207 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 CLVS2Q5SYC1 327 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 LIN54Q6MZP7 749 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 ALKAL2Q6UX46 152 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 C1orf210Q8IVY1 113 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 ADAD2Q8NCV1 583 aaKnown RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 GJC3Q8NFK1 279 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 OR5M8Q8NGP6 311 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 ZC3H10Q96K80 434 aaKnown RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 NUDT16L1Q9BRJ7 211 aaKnown RBP13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 IFT46Q9NQC8 304 aa13.48□□□□□ -0.25
CACNA1E-208ENST00000533229 RFPL4AA6NLU0 287 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 RFPL4AL1F8VTS6 287 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 VAMP5O95183 116 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 CD34P28906 385 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 GUCA1AP43080 201 aaPredicted RBP13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 SLC6A9P48067 706 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 B3GALT5-AS1P59052 145 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 OR2W3Q7Z3T1 314 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 YRDCQ86U90 279 aaKnown RBP13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 ARMC10Q8N2F6 343 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 KCNG3Q8TAE7 436 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 RAB3CQ96E17 227 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 GPER1Q99527 375 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 C1QTNF6Q9BXI9 259 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 NOP16Q9Y3C1 178 aaKnown RBP13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 SPEF1Q9Y4P9 236 aa13.47□□□□□ -0.25
CACNA1E-208ENST00000533229 RP2O75695 350 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 CRTAPO75718 401 aaPredicted RBP13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 SCGNO76038 276 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 M6PRP20645 277 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 HIST1H3AP68431 136 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 UBE2V2Q15819 145 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 HIST2H3PS2Q5TEC6 136 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 TCEAL6Q6IPX3 200 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 SLC23A3Q6PIS1 610 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 HIST2H3AQ71DI3 136 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 PPP1R32Q7Z5V6 425 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 RTTNQ86VV8 2226 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 NAXDQ8IW45 347 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 ARHGAP5-AS1Q96IT6 56 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 SEC22AQ96IW7 307 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 DMRTA2Q96SC8 542 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 MFFQ9GZY8 342 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 ZNF224Q9NZL3 707 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
CACNA1E-208ENST00000533229 C9orf170A2RU37 121 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 B8ZZF3 427 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 SNAPC5O75971 98 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 CD8AP01732 235 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 RFPL3SP0C7P2 107 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 FAHP16930 419 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 OTX1P32242 354 aaPredicted RBP13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 OTX2P32243 289 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 GMFBP60983 142 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 ZXDAP98168 799 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 KISS1Q15726 138 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 MICBQ29980 383 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 GSG1LQ6UXU4 331 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 LYG2Q86SG7 212 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 BEST3Q8N1M1 668 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 OR4K15Q8NH41 348 aa13.46□□□□□ -0.26
CACNA1E-208ENST00000533229 ST8SIA4Q92187 359 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms