RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CEPT1Q9Y6K0 416 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 LYNX1G3V0Z9 82 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 KRT8P05787 483 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 CST2P09228 141 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR8G3PP0DMU2 310 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 LYNX1P0DP58 116 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 CD36P16671 472 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 MPGP29372 298 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 TGFBR2P37173 567 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 PSMB10P40306 273 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 CAPZA2P47755 286 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 RGS6P49758 472 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 GTF2A1P52655 376 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 NAAAQ02083 359 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 ROM1Q03395 351 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 EGR3Q06889 387 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 KCTD18Q6PI47 426 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 LRRN1Q6UXK5 716 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF813Q6ZN06 617 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 ABHD12BQ7Z5M8 362 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 KRT77Q7Z794 578 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 LRRC18Q8N456 261 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLC22A24Q8N4F4 322 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 YIPF7Q8N8F6 280 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZFP41Q8N8Y5 198 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 ST7LQ8TDW4 575 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 PELI1Q96FA3 418 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 BOD1Q96IK1 185 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 MAP6Q96JE9 813 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 SH3GL3Q99963 347 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 FUNDC2Q9BWH2 189 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 MMP27Q9H306 513 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 C1orf198Q9H425 327 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 MOV10Q9HCE1 1003 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 CENPMQ9NSP4 180 aa9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 SIRT4Q9Y6E7 314 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-213ENST00000533149 VWFP04275 2813 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 CCRL2O00421 344 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 OGG1O15527 345 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 RPP14O95059 124 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 B4GALT1P15291 398 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 CPEP16870 476 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 ACHEP22303 614 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 TMEM33P57088 247 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 HIST1H3AP68431 136 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 BDH1Q02338 343 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 SSX1Q16384 188 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 C3orf36Q3SXR2 165 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 HIST2H3PS2Q5TEC6 136 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 LIPKQ5VXJ0 399 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 ANKRD16Q6P6B7 361 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 CFAP77Q6ZQR2 320 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 HIST2H3AQ71DI3 136 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 SKA3Q8IX90 412 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF679Q8IYX0 411 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 GJC3Q8NFK1 279 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 UFD1Q92890 307 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 DGCR14Q96DF8 476 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLAMF6Q96DU3 332 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 TMPRSS13Q9BYE2 586 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 FAM192AQ9GZU8 254 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 NAA50Q9GZZ1 169 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 TRIM36Q9NQ86 728 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 ACOXLQ9NUZ1 547 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 ASH2LQ9UBL3 628 aa9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 PRKDCP78527 4128 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-213ENST00000533149 A0A096LPE4 126 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 PNMA8CA0A1B0GUJ8 204 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 A0A1W2PPZ6 126 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 RER1O15258 196 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF254O75437 659 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 FARS2O95363 451 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 ABHD16AO95870 558 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 H2BFMP0C1H6 154 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 PATE4P0C8F1 98 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 CELP19835 753 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 THBS4P35443 961 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 RIDAP52758 137 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 LMO4P61968 165 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 CCDC92Q53HC0 331 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 RPL22L1Q6P5R6 122 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 DEGS2Q6QHC5 323 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF627Q7L945 461 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 FAM220AQ7Z4H9 259 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 ANKRD13BQ86YJ7 626 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR10S1Q8NGN2 331 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 FGFBP3Q8TAT2 258 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 RNF133Q8WVZ7 376 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 RDH5Q92781 318 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 BCL2L2Q92843 193 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 MROQ9BYG7 248 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 KCNN2Q9H2S1 579 aa9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC4-213ENST00000533149 M0QZ24 198 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms