RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RACGAP1Q9H0H5 632 aa2.53□□□□□ -2
CTR9-204ENST00000529355 OR52A5Q9H2C5 316 aa2.53□□□□□ -2
CTR9-204ENST00000529355 SIRT7Q9NRC8 400 aa2.53□□□□□ -2
CTR9-204ENST00000529355 UVRAGQ9P2Y5 699 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CTSFQ9UBX1 484 aa2.53□□□□□ -2
CTR9-204ENST00000529355 STOML2Q9UJZ1 356 aa2.53□□□□□ -2
CTR9-204ENST00000529355 PSMD13Q9UNM6 376 aa2.53□□□□□ -2
CTR9-204ENST00000529355 HYOU1Q9Y4L1 999 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ASB4Q9Y574 426 aa2.53□□□□□ -2
CTR9-204ENST00000529355 PUS1Q9Y606 427 aaKnown RBP eCLIP2.53□□□□□ -2
CTR9-204ENST00000529355 NPTNQ9Y639 398 aa2.53□□□□□ -2
CTR9-204ENST00000529355 SPEF2Q9C093 1822 aa2.53□□□□□ -2
CTR9-204ENST00000529355 DNMBPQ6XZF7 1577 aa2.53□□□□□ -2.01
CTR9-204ENST00000529355 REREQ9P2R6 1566 aa2.53□□□□□ -2.01
CTR9-204ENST00000529355 NUP214P35658 2090 aaPredicted RBP2.53□□□□□ -2.01
CTR9-204ENST00000529355 DOCK9Q9BZ29 2069 aa2.53□□□□□ -2.01
CTR9-204ENST00000529355 NCOA2Q15596 1464 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TCHHQ07283 1943 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 CLUHO75153 1309 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 MROH7Q68CQ1 1323 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 A0A1W2PP18 115 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 GNG14A0A1W2PPG7 69 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PQLC2LA1A4F0 135 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 SMIM23A6NLE4 172 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF729A6NN14 1252 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF716A6NP11 495 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TXNDC9O14530 226 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ACOX3O15254 700 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 GMDSO60547 372 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 DCTN3O75935 186 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 GABARAPO95166 117 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 CD5P06127 495 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF735P0CB33 412 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 OCM2P0CE71 109 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 OCMP0CE72 109 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 COX4I1P13073 169 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 NCF2P19878 526 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 RAB3AP20336 220 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PTNP21246 168 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 MSR1P21757 451 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 GYG1P46976 350 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 SLC11A1P49279 550 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 CYB561P49447 251 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 RAP1AP62834 184 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ELF3P78545 371 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 REEP5Q00765 189 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 KRR1Q13601 381 aaKnown RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 HSDL1Q3SXM5 330 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 LIN52Q52LA3 116 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 C5orf47Q569G3 176 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 Q5W150 140 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 DHRS4L2Q6PKH6 230 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 C5orf46Q6UWT4 87 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 LRRC74BQ6ZQY2 392 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 BIVMQ86UB2 503 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PDIK1LQ8N165 341 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 CYP4Z2PQ8N1L4 340 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF615Q8N8J6 731 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZFP41Q8N8Y5 198 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 OR1S2Q8NGQ3 325 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 SYNPRQ8TBG9 265 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PLPPR1Q8TBJ4 325 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 LRRC20Q8TCA0 184 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 LKAAEAR1Q8TD35 194 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TCP10LQ8TDR4 215 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 NAT14Q8WUY8 206 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ESR2Q92731 530 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 STMN2Q93045 179 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 BORCS5Q969J3 196 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 YIPF5Q969M3 257 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ECHDC3Q96DC8 303 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TCEAL4Q96EI5 215 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 BIRC8Q96P09 236 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 XPO6Q96QU8 1125 aaKnown RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 ACBD6Q9BR61 282 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF251Q9BRH9 671 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TCEAL7Q9BRU2 100 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ZNF717Q9BY31 904 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 SLC19A3Q9BZV2 496 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 ALX4Q9H161 411 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 METTL9Q9H1A3 318 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 MYOZ1Q9NP98 299 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 CHRAC1Q9NRG0 131 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PEF1Q9UBV8 284 aaKnown RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 OR12D3Q9UGF7 316 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 GLS2Q9UI32 602 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 PYCARDQ9ULZ3 195 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 KIF14Q15058 1648 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 INO80Q9ULG1 1556 aaPredicted RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 MYH6P13533 1939 aa2.52□□□□□ -2.01
CTR9-204ENST00000529355 TOP2AP11388 1531 aaKnown RBP2.52□□□□□ -2.01
CTR9-204ENST00000529355 SETD1AO15047 1707 aaKnown RBP2.51□□□□□ -2.01
CTR9-204ENST00000529355 POLR3AO14802 1390 aaPredicted RBP2.51□□□□□ -2.01
CTR9-204ENST00000529355 NUP155O75694 1391 aa2.51□□□□□ -2.01
CTR9-204ENST00000529355 LRPPRCP42704 1394 aaKnown RBP2.51□□□□□ -2.01
CTR9-204ENST00000529355 ABCC12Q96J65 1359 aa2.51□□□□□ -2.01
CTR9-204ENST00000529355 A0A1W2PRG6 482 aa2.51□□□□□ -2.01
CTR9-204ENST00000529355 VPS37CA5D8V6 355 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms