RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 PDE10AQ9Y233 779 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 KCNIP3Q9Y2W7 256 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 STYXL1Q9Y6J8 313 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CDH10Q9Y6N8 788 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ANKRD36BQ8N2N9 1353 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 PLEKHH1Q9ULM0 1364 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TAF1LQ8IZX4 1826 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 CPSF1Q10570 1443 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 UHRF1BP1Q6BDS2 1440 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 MIA2Q96PC5 1412 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FAM25AB3EWG3 89 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FAM25CB3EWG5 89 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FAM25GB3EWG6 89 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 B4DXG7 233 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 G3V2T6 193 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 SULT2B1O00204 365 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 CHST1O43916 411 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 AIREO43918 545 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 UGT2B11O75310 529 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 BANF1O75531 89 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 DCTN3O75935 186 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 OR2J2O76002 312 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 GAS8-AS1O95177 125 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TNFAIP8O95379 198 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TDP2O95551 362 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 GAPDHP04406 335 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 OR8U9P0C7N5 309 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 CT45A10P0DMU9 189 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 C1GALT1C1LP0DN25 315 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ZNF25P17030 456 aaPredicted RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 COX5AP20674 150 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 PAX6P26367 422 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 HTR2CP28335 458 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 GNRHRP30968 328 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FOXN2P32314 431 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 CSKP41240 450 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ELK3P41970 407 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 AKR1C3P42330 323 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 RBM34P42696 430 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 QARSP47897 775 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 EFNA3P52797 238 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 LIM2P55344 173 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 HILS1P60008 231 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 UBE2KP61086 200 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ACVR1Q04771 509 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TPBGQ13641 420 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 GLYR1Q49A26 553 aaPredicted RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 ACSM3Q53FZ2 586 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 RNASE10Q5GAN6 216 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 DNLZQ5SXM8 178 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 N4BP2L1Q5TBK1 243 aaPredicted RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 LPCAT4Q643R3 524 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TMEM42Q69YG0 159 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 MED27Q6P2C8 311 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 DRAM2Q6UX65 266 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TFAP2EQ6VUC0 442 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TMEM179Q6ZVK1 233 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TCF24Q7RTU0 167 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 SLC47A2Q86VL8 602 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 SLC22A18ASQ8N1D0 253 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 OR2L13Q8N349 312 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ZNF738Q8NE65 137 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 OR5L1Q8NGL2 311 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 OR6K3Q8NGY3 331 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 OR4Q3Q8NH05 313 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ABHD3Q8WU67 409 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 SDR42E1Q8WUS8 393 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TOMM40LQ969M1 308 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 C12orf43Q96C57 262 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 PPP3R2Q96LZ3 170 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 CNN2Q99439 309 aaKnown RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 SDHCQ99643 169 aaPredicted RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 EBF4Q9BQW3 602 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ZNF670Q9BS34 389 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 TMEM208Q9BTX3 173 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 ARV1Q9H2C2 271 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 NMRAL1Q9HBL8 299 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 NLE1Q9NVX2 485 aaPredicted RBP2.61□□□□□ -1.99
CD44-229ENST00000528672 KIF25Q9UIL4 384 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 PEX16Q9Y5Y5 336 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FRMPD3Q5JV73 1810 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FLT4P35916 1363 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 FER1L5A0AVI2 2057 aa2.61□□□□□ -1.99
CD44-229ENST00000528672 VPS8Q8N3P4 1428 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 A0A1B0GUS0 222 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 TCRBV9S1A1TA0A576 114 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 VPS37CA5D8V6 355 aaPredicted RBP2.6□□□□□ -1.99
CD44-229ENST00000528672 LINC00862A6NCI5 91 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 HACD1B0YJ81 288 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 IDSB3KWA1 339 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 TSTD3H0UI37 97 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 SLC17A2O00624 439 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 UBDO15205 165 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 RGS5O15539 181 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 EDIL3O43854 480 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 SCRG1O75711 98 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 EIF3GO75821 320 aaKnown RBP eCLIP2.6□□□□□ -1.99
CD44-229ENST00000528672 TMEM50AO95807 157 aa2.6□□□□□ -1.99
CD44-229ENST00000528672 ORM1P02763 201 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms