RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 OR5V1Q9UGF6 321 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF391Q9UJN7 358 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 TRAPPC2LH3BP13 241 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 PSMA6P60900 246 aaKnown RBP27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 DCDC5Q6ZRR9 648 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 USP43Q70EL4 1123 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 NLRC3Q7RTR2 1065 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 NEIL1Q96FI4 390 aaPredicted RBP27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 PGAM5Q96HS1 289 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 SSBP3Q9BWW4 388 aaPredicted RBP27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 MMP26Q9NRE1 261 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF319Q9P2F9 582 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 LAMP5Q9UJQ1 280 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 KLHDC2Q9Y2U9 406 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 INSIG2Q9Y5U4 225 aa27.65■■■□□ 2.02
SSSCA1-205ENST00000527920 CCDC182A6NF36 153 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 ZAR1LA6NP61 321 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 CIB2O75838 187 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 SRSF2Q01130 221 aaKnown RBP27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF154Q13106 437 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 OR8B8Q15620 311 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 FAM201AQ5SY85 155 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 SLX4IPQ5VYV7 408 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 DEGS2Q6QHC5 323 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 ASRGL1Q7L266 308 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 CSNK2A3Q8NEV1 391 aa27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF418Q8TF45 676 aaPredicted RBP27.64■■■□□ 2.02
SSSCA1-205ENST00000527920 ARHGAP32A7KAX9 2087 aa27.64■■■□□ 2.01
SSSCA1-205ENST00000527920 PRKYO43930 277 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 GSK3AP49840 483 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 EFNB1P98172 346 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 KCTD18Q6PI47 426 aaPredicted RBP27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 FTMTQ8N4E7 242 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 OR8B3Q8NGG8 313 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 OR8B2Q96RD0 313 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 TRIM36Q9NQ86 728 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 TMEM14AQ9Y6G1 99 aa27.63■■■□□ 2.01
SSSCA1-205ENST00000527920 MITFO75030 526 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 ADRA2CP18825 462 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 KCNJ8Q15842 424 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 C12orf73Q69YU5 71 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 LRRN1Q6UXK5 716 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 ZFAND2BQ8WV99 257 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 DVL3Q92997 716 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 ITFG2Q969R8 447 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 BRD7Q9NPI1 651 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 LRP12Q9Y561 859 aa27.62■■■□□ 2.01
SSSCA1-205ENST00000527920 ACOD1A6NK06 481 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 LGALS8O00214 317 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 PAX2Q02962 417 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 AMIGO2Q86SJ2 522 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 SEMA6DQ8NFY4 1073 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 OR8S1Q8NH09 359 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 ASB17Q8WXJ9 295 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 LRTOMTQ8WZ04 291 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 DACT3Q96B18 629 aaPredicted RBP27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 CENPNQ96H22 339 aaPredicted RBP27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 AUP1Q9Y679 476 aa27.61■■■□□ 2.01
SSSCA1-205ENST00000527920 PHYHO14832 338 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 DCTDP32321 178 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 PSMB10P40306 273 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 PITPNBP48739 271 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 GNB2P62879 340 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 ROM1Q03395 351 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 KRT77Q7Z794 578 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 TMEM163Q8TC26 289 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 MRI1Q9BV20 369 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 ABCB9Q9NP78 766 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 C1orf123Q9NWV4 160 aa27.6■■■□□ 2.01
SSSCA1-205ENST00000527920 EPHA2P29317 976 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 PAX8Q06710 450 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 GFOD2Q3B7J2 385 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 AADACL4Q5VUY2 407 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 NXNL2Q5VZ03 156 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 MEPCEQ7L2J0 689 aaKnown RBP27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 OSBPL10Q9BXB5 764 aa27.59■■■□□ 2.01
SSSCA1-205ENST00000527920 SLC22A31A6NKX4 558 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 NDUFA2O43678 99 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 ZNF254O75437 659 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 VENTXO95231 258 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 GRPP07492 148 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 PPIAL4GP0DN37 164 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 GNALP38405 381 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 HILS1P60008 231 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 CNN2Q99439 309 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 MNTQ99583 582 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 SUCNR1Q9BXA5 334 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 MROQ9BYG7 248 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 RNPEPL1Q9HAU8 725 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 CLN8Q9UBY8 286 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 MPC1Q9Y5U8 109 aa27.58■■■□□ 2.01
SSSCA1-205ENST00000527920 TRAV38-1A0A0B4J264 116 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 A6NLC8 198 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 LHBP01229 141 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 HCCSP53701 268 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 IL5RAQ01344 420 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 BTNL3Q6UXE8 466 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 ZNF679Q8IYX0 411 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 TCEANCQ8N8B7 351 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 OR8B12Q8NGG6 310 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms