RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 CYB561A3Q8NBI2 242 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 RAB40AQ8WXH6 277 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 KCNJ15Q99712 375 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 PLA2G12AQ9BZM1 189 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 KRT84Q9NSB2 600 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 DYSFO75923 2080 aa11.88□□□□□ -0.51
CAPN1-212ENST00000527887 IGHV2-70DA0A0C4DH43 119 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 GGT3PA6NGU5 568 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 PHYHO14832 338 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 NDUFA2O43678 99 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 HLA-DPB1P04440 258 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 CD80P33681 288 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 PMELP40967 661 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 MTNR1AP48039 350 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 BPIFB3P59826 476 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF92Q03936 586 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 FOXL1Q12952 345 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 TAF13Q15543 124 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 KLF17Q5JT82 389 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-212ENST00000527887 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 DCXRQ7Z4W1 244 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 HS3ST5Q8IZT8 346 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 OR8D4Q8NGM9 314 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 OR10S1Q8NGN2 331 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 UPRTQ96BW1 309 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 SLAMF6Q96DU3 332 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 COPS4Q9BT78 406 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 ESM1Q9NQ30 184 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
CAPN1-212ENST00000527887 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
CAPN1-212ENST00000527887 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 LOC100130705A0A1B0GUX0 176 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 MAGEA13PA6NCF6 341 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 TVP23AA6NH52 213 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF878C9JN71 531 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 XRCC2O43543 280 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 LIPFP07098 398 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF3P17036 446 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 SPI1P17947 270 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CA6P23280 308 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CFL1P23528 166 aaKnown RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 PRTN3P24158 256 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 PSMB10P40306 273 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 PITPNBP48739 271 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 PPP1R8Q12972 351 aaKnown RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 HNRNPA0Q13151 305 aaKnown RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CRMP1Q14194 572 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CD276Q5ZPR3 534 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 SGMS2Q8NHU3 365 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 HRASLS5Q96KN8 279 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 MBOAT4Q96T53 435 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 MS4A7Q9GZW8 240 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CMC2Q9NRP2 79 aa11.86□□□□□ -0.51
CAPN1-212ENST00000527887 CLDN34H7C241 214 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 FAM20BO75063 409 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF205O95201 554 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 TNFAIP8O95379 198 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 SPARCP09486 303 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 HKR1P10072 659 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 DBPQ10586 325 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 WDR25Q64LD2 544 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 SHFQ7M4L6 423 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 C8orf59Q8N0T1 100 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF511Q8NB15 262 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 OR51L1Q8NGJ5 315 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 OR9Q1Q8NGQ5 310 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 OR4Q3Q8NH05 313 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 CYGBQ8WWM9 190 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 APOL4Q9BPW4 351 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 NUDT16L1Q9BRJ7 211 aaKnown RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 ADAT1Q9BUB4 502 aaKnown RBP11.85□□□□□ -0.51
CAPN1-212ENST00000527887 CENPMQ9NSP4 180 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 C14orf119Q9NWQ9 140 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 ERVK-18Q9QC07 812 aa11.85□□□□□ -0.51
CAPN1-212ENST00000527887 TRAV38-1A0A0B4J264 116 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 LGALS8O00214 317 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
CAPN1-212ENST00000527887 PLATP00750 562 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms