RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SPATS1Q496A3 300 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 FAM90A1Q86YD7 464 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 GCSAMQ8N6F7 178 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 SCCPDHQ8NBX0 429 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 OR2T33Q8NG76 320 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 TBC1D15Q8TC07 691 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 ST8SIA4Q92187 359 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 OTULINQ96BN8 352 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 SP140LQ9H930 580 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 ACOXLQ9NUZ1 547 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 U3KQV3 271 aa18.54■□□□□ 0.56
TRAPPC4-208ENST00000527680 SOX14O95416 240 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 ECDO95905 644 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 MELTFP08582 738 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 MMP9P14780 707 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 CX3CR1P49238 355 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 BLVRAP53004 296 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 SLC25A1P53007 311 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 PCK2Q16822 640 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 MICBQ29980 383 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 TEX30Q5JUR7 227 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 ZNF770Q6IQ21 691 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 SLC16A9Q7RTY1 509 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 DPY19L4Q7Z388 723 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 PDZD9Q8IXQ8 264 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 LRRC29Q8WV35 223 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 ARMC1Q9NVT9 282 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 ACTR3BQ9P1U1 418 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 ARL2BPQ9Y2Y0 163 aa18.53■□□□□ 0.56
TRAPPC4-208ENST00000527680 IGHV1-69DA0A0B4J2H0 117 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 DHRS12A0PJE2 317 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 RIIAD1A6NNX1 92 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 LHBP01229 141 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 IGHV1-69P01742 117 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 SRSF4Q08170 494 aaKnown RBP18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 TMEM86BQ8N661 226 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 OR4Q3Q8NH05 313 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 SSMEM1Q8WWF3 244 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 SGK3Q96BR1 496 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 REEP6Q96HR9 211 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 TOR3AQ9H497 397 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 CNTD2Q9H8S5 307 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 REEP1Q9H902 201 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 BRD7Q9NPI1 651 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 C1RLQ9NZP8 487 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 DNAJC27Q9NZQ0 273 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 SAMHD1Q9Y3Z3 626 aaKnown RBP18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 POMT1Q9Y6A1 747 aa18.52■□□□□ 0.56
TRAPPC4-208ENST00000527680 DCTN3O75935 186 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 APOC1P02654 83 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 ZNF3P17036 446 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 ATP6V1B2P21281 511 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 GNALP38405 381 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 MNAT1P51948 309 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 FAM3AP98173 230 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 DEFA6Q01524 100 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 MICAQ29983 383 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 GFOD2Q3B7J2 385 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 OLFML2AQ68BL7 652 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 FAM57BQ71RH2 274 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 ERI1Q8IV48 349 aaKnown RBP18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR6N2Q8NGY6 317 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 SPSB4Q96A44 273 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 CCL13Q99616 98 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 NMNAT2Q9BZQ4 307 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 SIRPDQ9H106 197 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 RNPEPL1Q9HAU8 725 aa18.51■□□□□ 0.55
TRAPPC4-208ENST00000527680 B2RBV5 119 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 ATP8B1O43520 1251 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 NAA10P41227 235 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 TEX36Q5VZQ5 186 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR2T5Q6IEZ7 315 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR1M1Q8NGA1 313 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR2T29Q8NH02 315 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 CCT8L2Q96SF2 557 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 INTS14Q96SY0 518 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 MED20Q9H944 212 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 KAAG1Q9UBP8 84 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 FAM96BQ9Y3D0 163 aa18.5■□□□□ 0.55
TRAPPC4-208ENST00000527680 TRRAPQ9Y4A5 3859 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 CLPSL1A2RUU4 121 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 MUC1P15941 1255 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 CFL1P23528 166 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 GSTT1P30711 240 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 GNGT1P63211 74 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 C11orf91Q3C1V1 193 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 FAM98BQ52LJ0 330 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 BRICD5Q6PL45 260 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 SLC36A1Q7Z2H8 476 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 DHFR2Q86XF0 187 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 C11orf53Q8IXP5 236 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR52H1Q8NGJ2 320 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 TEX47Q8TBZ9 253 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 PGAM5Q96HS1 289 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 ABHD6Q9BV23 337 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 PAPOLGQ9BWT3 736 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 DGCR6LQ9BY27 220 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 OR10A2Q9H208 303 aa18.49■□□□□ 0.55
TRAPPC4-208ENST00000527680 ONECUT1Q9UBC0 465 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms