RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 H2AFY2Q9P0M6 372 aaPredicted RBP9.06□□□□□ -0.96
SYVN1-208ENST00000527142 WARS2Q9UGM6 360 aaKnown RBP9.06□□□□□ -0.96
SYVN1-208ENST00000527142 N6AMT1Q9Y5N5 214 aa9.06□□□□□ -0.96
SYVN1-208ENST00000527142 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PPIAL4EA0A075B759 164 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PPIAL4CA0A0B4J2A2 164 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 A0A0U1RQV5 110 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PPIAL4DF5H284 164 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 J3QLI3 93 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PNPP00491 289 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 SBK2P0C263 348 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PPIAL4FP0DN26 164 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 IRF2P14316 349 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 HTR1FP30939 366 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 SCGB2A2Q13296 93 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 MAB21L1Q13394 359 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 GFOD2Q3B7J2 385 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PQLC1Q8N2U9 271 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 CBR4Q8N4T8 237 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 TRUB1Q8WWH5 349 aaKnown RBP9.05□□□□□ -0.96
SYVN1-208ENST00000527142 SGK3Q96BR1 496 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 OR8B4Q96RC9 309 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 C9orf16Q9BUW7 83 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 MOB1AQ9H8S9 216 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 LPAR2Q9HBW0 351 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 S100A14Q9HCY8 104 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 FAM206AQ9NX38 181 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 IMPAD1Q9NX62 359 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 UBAP1Q9NZ09 502 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.05□□□□□ -0.96
SYVN1-208ENST00000527142 PCDHB10Q9UN67 800 aa9.05□□□□□ -0.96
SYVN1-208ENST00000527142 TMEM269A0A1B0GVZ9 245 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 A8MXK9 166 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 ZNF670-ZNF695F2Z2N8 137 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 F5H0A9 414 aaPredicted RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 PLPP2O43688 288 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 FAM20BO75063 409 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 FOXH1O75593 365 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 POLR2IP36954 125 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 GNALP38405 381 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 RIDAP52758 137 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 IL5RAQ01344 420 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 EGR3Q06889 387 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 SLC25A30Q5SVS4 291 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 ZNF322Q6U7Q0 402 aaPredicted RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 BCDIN3DQ7Z5W3 292 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 OR8S1Q8NH09 359 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 ZNF420Q8TAQ5 688 aaPredicted RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 FAM81AQ8TBF8 368 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 STMN2Q93045 179 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 PAPOLGQ9BWT3 736 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 TRIM36Q9NQ86 728 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 G6PC2Q9NQR9 355 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 ZNF319Q9P2F9 582 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 NUFIP1Q9UHK0 495 aaKnown RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 IKZF2Q9UKS7 526 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 COPS3Q9UNS2 423 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
SYVN1-208ENST00000527142 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
SYVN1-208ENST00000527142 IGHV3-64DA0A0J9YX35 117 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 ANXA2P2A6NMY6 339 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 CEACAM18A8MTB9 384 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 KIAA1324LA8MWY0 1029 aaPredicted RBP9.03□□□□□ -0.96
SYVN1-208ENST00000527142 PRR32B1ATL7 298 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 E9PQ18 207 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 CYB5R3P00387 301 aaPredicted RBP9.03□□□□□ -0.96
SYVN1-208ENST00000527142 CST4P01036 141 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 ATP6V1B1P15313 513 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 SRP14P37108 136 aaKnown RBP9.03□□□□□ -0.96
SYVN1-208ENST00000527142 PMELP40967 661 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 HCCSP53701 268 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 CXCR4P61073 352 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 SNRPGP62308 76 aaKnown RBP9.03□□□□□ -0.96
SYVN1-208ENST00000527142 MPPED2Q15777 294 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 KCNJ8Q15842 424 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 ZNF404Q494X3 552 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 ESCO2Q56NI9 601 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 PRAMEF6Q5VXH4 476 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 NLRC3Q7RTR2 1065 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 RFLNBQ8N5W9 214 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 OR51G2Q8NGK0 314 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.03□□□□□ -0.96
SYVN1-208ENST00000527142 RHBDD3Q9Y3P4 386 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 MPC1Q9Y5U8 109 aa9.03□□□□□ -0.96
SYVN1-208ENST00000527142 CUBNO60494 3623 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 DYSFO75923 2080 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 SNTNA6NMZ2 147 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 KRT8P05787 483 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 OR2T7P0C7T2 308 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 RPS2P15880 293 aaKnown RBP9.02□□□□□ -0.97
SYVN1-208ENST00000527142 ACKR3P25106 362 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 LCN2P80188 198 aa9.02□□□□□ -0.97
SYVN1-208ENST00000527142 HNRNPA0Q13151 305 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms