RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 GPR37O15354 613 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 ANOS1P23352 680 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 DDOSTP39656 456 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 SMIM11AP58511 58 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 ELF3P78545 371 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-210ENST00000527027 CBX1P83916 185 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 HIST2H2BDQ6DRA6 164 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 SLC35E4Q6ICL7 350 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 C8orf82Q6P1X6 216 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-210ENST00000527027 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 C11orf53Q8IXP5 236 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 LNX2Q8N448 690 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 OR56B2PQ8NGI1 322 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 KCTD14Q9BQ13 255 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-210ENST00000527027 OPA3Q9H6K4 179 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 SIRT7Q9NRC8 400 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 FBLN5Q9UBX5 448 aa13.22□□□□□ -0.29
PTPRU-210ENST00000527027 A0A1B0GW55 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 ANKRD61A6NGH8 418 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 NPFFO15130 113 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 NDUFB3O43676 98 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 COX4I1P13073 169 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 RPS27P42677 84 aaKnown RBP13.21□□□□□ -0.29
PTPRU-210ENST00000527027 PRKXP51817 358 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 PCK2Q16822 640 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4L9Q6RFH8 374 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-210ENST00000527027 OR4C15Q8NGM1 316 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 OR8S1Q8NH09 359 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DCAF13Q9NV06 445 aaKnown RBP13.21□□□□□ -0.29
PTPRU-210ENST00000527027 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
PTPRU-210ENST00000527027 TVP23AA6NH52 213 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 ANKRD30BLA7E2S9 258 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 XRCC2O43543 280 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PAHP00439 452 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 OPN1MWP04001 364 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 OPN1MW2P0DN77 364 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 OPN1MW3P0DN78 364 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 GABRA5P31644 462 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PYCR1P32322 319 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 TGM4P49221 684 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PRB3Q04118 309 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-210ENST00000527027 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRU-210ENST00000527027 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-210ENST00000527027 GLYATQ6IB77 296 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 Q6ZTK2 550 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 DPY19L4Q7Z388 723 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 DCXRQ7Z4W1 244 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 FAM216BQ8N7L0 139 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 Q8N7P7 452 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PROKR2Q8NFJ6 384 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 DCTN5Q9BTE1 182 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PPA2Q9H2U2 334 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 DNAJB11Q9UBS4 358 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
PTPRU-210ENST00000527027 SAMD4AQ9UPU9 718 aaKnown RBP13.2□□□□□ -0.3
PTPRU-210ENST00000527027 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
PTPRU-210ENST00000527027 A0A1W2PRD5 423 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 A0A1W2PRF3 423 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 A0A1W2PRM7 423 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 MEIOCA2RUB1 952 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-210ENST00000527027 ACOT8O14734 319 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 ALX3O95076 343 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 GADD45GO95257 159 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 SLC2A1P11166 492 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 PRDX6P30041 224 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 IFNGR2P38484 337 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-210ENST00000527027 GSSP48637 474 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 IKZF1Q13422 519 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 TAF13Q15543 124 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 ATPAF1Q5TC12 328 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-210ENST00000527027 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 WDR82Q6UXN9 313 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 ZDHHC21Q8IVQ6 265 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 CYB561A3Q8NBI2 242 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms