RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SIT1Q9Y3P8 196 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
SMIM3-201ENST00000526627 IGHV1-45A0A0A0MS14 117 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 OR2F2O95006 317 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 NUP62P37198 522 aaPredicted RBP17.95■□□□□ 0.46
SMIM3-201ENST00000526627 OR2F1Q13607 317 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 GFOD2Q3B7J2 385 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 HSD17B13Q7Z5P4 300 aaPredicted RBP17.95■□□□□ 0.46
SMIM3-201ENST00000526627 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.95■□□□□ 0.46
SMIM3-201ENST00000526627 FBXW5Q969U6 566 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 NTNG2Q96CW9 530 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 TMEM41AQ96HV5 264 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 IMMP1LQ96LU5 166 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 PHB2Q99623 299 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 PILRBQ9UKJ0 227 aa17.95■□□□□ 0.46
SMIM3-201ENST00000526627 IFNA6P05013 189 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 HCKP08631 526 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 SGCAQ16586 387 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 DMRTC1Q5HYR2 192 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 MARCH1Q8TCQ1 289 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 CASTOR1Q8WTX7 329 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 TMEM59Q9BXS4 323 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 COMMD9Q9P000 198 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 DBX1A6NMT0 343 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 MFNGO00587 321 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 DUS4LO95620 317 aaKnown RBP17.94■□□□□ 0.46
SMIM3-201ENST00000526627 AKR1C4P17516 323 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 LSM6P62312 80 aaKnown RBP17.94■□□□□ 0.46
SMIM3-201ENST00000526627 ENDOGQ14249 297 aaKnown RBP17.94■□□□□ 0.46
SMIM3-201ENST00000526627 TMEM54Q969K7 222 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 LIN37Q96GY3 246 aaPredicted RBP17.94■□□□□ 0.46
SMIM3-201ENST00000526627 VRK1Q99986 396 aaPredicted RBP17.94■□□□□ 0.46
SMIM3-201ENST00000526627 SHARPINQ9H0F6 387 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 SLC25A32Q9H2D1 315 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 RASL12Q9NYN1 266 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 GPR160Q9UJ42 338 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 SESN1Q9Y6P5 492 aa17.94■□□□□ 0.46
SMIM3-201ENST00000526627 A0A087WZY1 265 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 BCL2L11O43521 198 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 CCL3P10147 92 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 COX6A1P12074 109 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 VAMP1P23763 118 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 ZNF133P52736 654 aaPredicted RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 VAX1Q5SQQ9 334 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 PMS2CLQ68D20 193 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 FOXL2NBQ6ZUU3 175 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 EIF4E3Q8N5X7 224 aaKnown RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 IFI44Q8TCB0 444 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 NAT6Q93015 286 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 NABP1Q96AH0 204 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 ZNF385AQ96PM9 386 aaKnown RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 PRO3102Q9H379 93 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 TLX3O43711 291 aaPredicted RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 CD63P08962 238 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 PRF1P14222 555 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 RSPO1Q2MKA7 263 aaPredicted RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 C10orf128Q5T292 105 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 C1QL2Q7Z5L3 287 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 ARHGAP5-AS1Q96IT6 56 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 GNRHR2Q96P88 292 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 ANGPTL4Q9BY76 406 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 PPA2Q9H2U2 334 aa17.93■□□□□ 0.46
SMIM3-201ENST00000526627 NXT1Q9UKK6 140 aaKnown RBP17.93■□□□□ 0.46
SMIM3-201ENST00000526627 IGHV3-15A0A0B4J1V0 119 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 D6RAR5 112 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 MSR1P21757 451 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 CSNK1A1P48729 337 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 IL11RAQ14626 422 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 ATXN7L3Q14CW9 347 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 BEX5Q5H9J7 111 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 FAM74A1Q5RGS3 127 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 ACOT7LQ6ZUV0 252 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 KCTD9Q7L273 389 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 STPG2Q8N412 459 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 TERB2Q8NHR7 220 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 ZNF75AQ96N20 296 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 OCSTAMPQ9BR26 566 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 ZNF700Q9H0M5 742 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 FOXI3A8MTJ6 420 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 FAM25EA8MYX2 175 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 KRBOX1C9JBD0 128 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 ZIC3O60481 467 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 CRTAPO75718 401 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 KLF7O75840 302 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 DLSTP36957 453 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 LUMP51884 338 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 PNLIPRP3Q17RR3 467 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 SMUG1Q53HV7 270 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 FAM89BQ8N5H3 189 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 TMEM230Q96A57 120 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 PGAM5Q96HS1 289 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 UCN2Q96RP3 112 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 BARX1Q9HBU1 254 aaPredicted RBP17.92■□□□□ 0.46
SMIM3-201ENST00000526627 SH2D2AQ9NP31 389 aa17.92■□□□□ 0.46
SMIM3-201ENST00000526627 TMEM265A0A087WTH1 108 aa17.91■□□□□ 0.46
SMIM3-201ENST00000526627 KANTRA0A1W2PQU2 76 aa17.91■□□□□ 0.46
SMIM3-201ENST00000526627 OR5H15A6NDH6 313 aa17.91■□□□□ 0.46
SMIM3-201ENST00000526627 CEACAM18A8MTB9 384 aa17.91■□□□□ 0.46
SMIM3-201ENST00000526627 LIFP15018 202 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms