RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZNF101Q8IZC7 436 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 OR5AS1Q8N127 324 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 OR6V1Q8N148 313 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 ZNF525Q8N782 197 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 OR2T33Q8NG76 320 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 OR6N2Q8NGY6 317 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 LIPHQ8WWY8 451 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 ZMYND19Q96E35 227 aaPredicted RBP4.4□□□□□ -1.71
SVIP-202ENST00000525670 LRR1Q96L50 414 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 GPX7Q96SL4 187 aaPredicted RBP4.4□□□□□ -1.71
SVIP-202ENST00000525670 CIB1Q99828 191 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 DHRS9Q9BPW9 319 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 TRAF4Q9BUZ4 470 aaPredicted RBP4.4□□□□□ -1.71
SVIP-202ENST00000525670 MRPL37Q9BZE1 423 aaKnown RBP4.4□□□□□ -1.71
SVIP-202ENST00000525670 OR2H1Q9GZK4 316 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 CXorf56Q9H5V9 222 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 ZNF556Q9HAH1 456 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 NTN4Q9HB63 628 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 CA10Q9NS85 328 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 KRT84Q9NSB2 600 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 B3GNT2Q9NY97 397 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 PLEK2Q9NYT0 353 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 TREM2Q9NZC2 230 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 PTTG3PQ9NZH4 202 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 DNAJC27Q9NZQ0 273 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 STX18Q9P2W9 335 aaKnown RBP4.4□□□□□ -1.71
SVIP-202ENST00000525670 DNAJB9Q9UBS3 223 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 MGAT4BQ9UQ53 548 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 GRIP1Q9Y3R0 1128 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 AP4S1Q9Y587 144 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
SVIP-202ENST00000525670 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 LOC100509620A0A075B734 347 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 IGLV1-36A0A0B4J1U3 117 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 C5orf63A6NC05 138 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 NPIPB13A6NJU9 1138 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 VSTM5A8MXK1 200 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 NPIPB4C9JG80 1138 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 F5H5K5 113 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 G3V2T6 193 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 H3BSH0 61 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 EI24O14681 340 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SGCEO43556 437 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 CD8AP01732 235 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 TFP02787 698 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 ADRA2AP08913 450 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 MMP7P09237 267 aaPredicted RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 DANCRP0C864 163 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SLC2A1P11166 492 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 NR2C1P13056 603 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 ZNF3P17036 446 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SPI1P17947 270 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 IGFBP5P24593 272 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 STOMP27105 288 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 TTKP33981 857 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 ARR3P36575 388 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 POLR2IP36954 125 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 SOX2P48431 317 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 GDI2P50395 445 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 ADIPOQQ15848 244 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 HIST3H3Q16695 136 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 TMEM255AQ5JRV8 349 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 AGAP6Q5VW22 663 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SHQ1Q6PI26 577 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 DNM1P34Q6PK57 102 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 ZNF611Q8N823 705 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 NPEPL1Q8NDH3 523 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 BHLHE23Q8NDY6 225 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 OR1J1Q8NGS3 322 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 OR5K1Q8NHB7 308 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SLC25A40Q8TBP6 338 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 IL4I1Q96RQ9 567 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 TBX5Q99593 518 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 PITX2Q99697 317 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 DGCR6LQ9BY27 220 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 PLK3Q9H4B4 646 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SIAEQ9HAT2 523 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 OBP2BQ9NPH6 170 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 FAIMQ9NVQ4 179 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 MRPL22Q9NWU5 206 aaKnown RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 TVP23BQ9NYZ1 205 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 CRNNQ9UBG3 495 aaPredicted RBP4.39□□□□□ -1.71
SVIP-202ENST00000525670 AASSQ9UDR5 926 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 KCNG2Q9UJ96 466 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 B9D1Q9UPM9 204 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 LHFPL6Q9Y693 200 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 COMMD3-BMI1R4GMX3 469 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 CR1P17927 2039 aa4.39□□□□□ -1.71
SVIP-202ENST00000525670 SVEP1Q4LDE5 3571 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 IGHV4-30-2A0A087WSY4 118 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 A0A0G2JK05 382 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms