RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 SLC22A20A6NK97 555 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 M0QZK8 103 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 GGCTO75223 188 aaKnown RBP12.42□□□□□ -0.42
LRRK1-202ENST00000525284 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 ZNF841Q6ZN19 808 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 UBTD1Q9HAC8 227 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 NDRG4Q9ULP0 352 aaKnown RBP12.42□□□□□ -0.42
LRRK1-202ENST00000525284 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
LRRK1-202ENST00000525284 OR52N4Q8NGI2 321 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 CSF3RQ99062 836 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 TEAD3Q99594 435 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 MIEN1Q9BRT3 115 aa12.42□□□□□ -0.42
LRRK1-202ENST00000525284 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 CSF2RAP15509 400 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 TNFRSF4P43489 277 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 TCL1AP56279 114 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 RPL30P62888 115 aaKnown RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 NPAS1Q99742 590 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 GPR87Q9BY21 358 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 B4E171 279 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 TNFRSF10CO14798 259 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MGPP08493 103 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 PLP1P60201 277 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 LILRA2Q8N149 483 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 CARFQ8N187 725 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 NID2Q14112 1375 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 SERPINE3A8MV23 424 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MS4A18H0YCH9 400 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 ZNF737O75373 536 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 CD1EP15812 388 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 AOAHP28039 575 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 PRDX1Q06830 199 aaKnown RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MS4A18Q3C1V0 323 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 EMCNQ9ULC0 261 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 LOC107984156A0A0G2JMH3 177 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 CLDN20P56880 219 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 ARL17AQ8IVW1 177 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 GMLQ99445 158 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MYH2Q9UKX2 1941 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 ACOT8O14734 319 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 HAAOP46952 286 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 FER1L6-AS2Q96M78 137 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 FAM53CQ9NYF3 392 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 HSPB8Q9UJY1 196 aa12.41□□□□□ -0.42
LRRK1-202ENST00000525284 IFITM10A6NMD0 228 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 HRO43593 1189 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 ZNF253O75346 499 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 GPANK1O95872 356 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 IGHEP01854 428 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 OR1D5P58170 312 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 TRAT1Q6PIZ9 186 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 ZNF383Q8NA42 475 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 AGBL5Q8NDL9 886 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 LKAAEAR1Q8TD35 194 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 PCYT2Q99447 389 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 NRSN2Q9GZP1 204 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 ROBO1Q9Y6N7 1651 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 DCTDP32321 178 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 UQCC3Q6UW78 93 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 YRDCQ86U90 279 aaKnown RBP12.4□□□□□ -0.42
LRRK1-202ENST00000525284 CALHM3Q86XJ0 350 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 ZADH2Q8N4Q0 377 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 STARD4Q96DR4 205 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 GPA33Q99795 319 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 DEFB127Q9H1M4 99 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 LHX3Q9UBR4 397 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 NUMA1Q14980 2115 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 DRD1P21728 446 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 FGF8P55075 233 aaPredicted RBP12.4□□□□□ -0.42
LRRK1-202ENST00000525284 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 CST9Q5W186 159 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
LRRK1-202ENST00000525284 A4GALTQ9NPC4 353 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 TIMM10BQ9Y5J6 103 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 A0A1B0GUH1 482 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 GFRA2O00451 464 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 DLK2Q6UY11 383 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 ABHD3Q8WU67 409 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms