RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KLHL36Q8N4N3 616 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 SPICQ8N5J4 248 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 RFLNBQ8N5W9 214 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 PLPP7Q8NBV4 271 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 CCDC54Q8NEL0 328 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 SEMA6DQ8NFY4 1073 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR8B12Q8NGG6 310 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 RHOXF1Q8NHV9 184 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR51E1Q8TCB6 317 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 HAVCR2Q8TDQ0 301 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 YIPF5Q969M3 257 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 UBE2FQ969M7 185 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 SGK3Q96BR1 496 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM71F1Q96KD3 344 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 RTL8AQ9BWD3 113 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 NARFLQ9H6Q4 476 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 TRIM36Q9NQ86 728 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 YAE1D1Q9NRH1 226 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM106BQ9NUM4 274 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM206AQ9NX38 181 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 TREM2Q9NZC2 230 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 ENPP5Q9UJA9 477 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR52A1Q9UKL2 312 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 WIPI2Q9Y4P8 454 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 MPC1Q9Y5U8 109 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 HSPE1-MOB4S4R3N1 261 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 CADP27708 2225 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 ALPK2Q86TB3 2170 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 PDZD2O15018 2839 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 TEX15Q9BXT5 2789 aa4.58□□□□□ -1.68
HMGB1P40-201ENST00000525121 AKAP6Q13023 2319 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 NBPF19A0A087WUL8 3843 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 DCHS2Q6V1P9 2916 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF816-ZNF321PA0A0X1KG74 233 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LOC100289279A0A1B0GTE1 492 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 A0A1B0GWJ7 208 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LRP5LA4QPB2 252 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 EFCAB10A6NFE3 127 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM210A6NLX4 147 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 DHRS7CA6NNS2 312 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 A8MV72 311 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 B4DSR2 109 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 H0YJX3 145 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 H0YL77 283 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 J3QLW9 94 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 MLNRO43193 412 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 SYT7O43581 403 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 CD5LO43866 347 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LILRA1O75019 489 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 DHRS3O75911 302 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GRPP07492 148 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 HTR1AP08908 422 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 CCDC159P0C7I6 412 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 OCM2P0CE71 109 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 OCMP0CE72 109 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF16P17020 682 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF19P17023 458 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 MDH2P40926 338 aaKnown RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GATA4P43694 442 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GBX2P52951 348 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 BTG1P62324 171 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 MFGE8Q08431 387 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRDX4Q13162 271 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF181Q2M3W8 571 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 TP53I3Q53FA7 332 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM255AQ5JRV8 349 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF684Q5T5D7 378 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZBTB37Q5TC79 503 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LIPNQ5VXI9 398 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PLCXD3Q63HM9 321 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMPRSS11AQ6ZMR5 421 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 DOK3Q7L591 496 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 NLRC3Q7RTR2 1065 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRSS45Q7RTY3 260 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GLCCI1Q86VQ1 547 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 EGFL6Q8IUX8 553 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZDHHC23Q8IYP9 409 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ELMOD2Q8IZ81 293 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LINC01356Q8N9X3 169 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR51F2Q8NH61 342 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 CLDND2Q8NHS1 167 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PIGCQ92535 297 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LGALS12Q96DT0 336 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 SIGLEC11Q96RL6 698 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 SMR3AQ99954 134 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ALG8Q9BVK2 526 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 COMMD4Q9H0A8 199 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 NEK6Q9HC98 313 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GCM1Q9NP62 436 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 GPR84Q9NQS5 396 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 UFSP2Q9NUQ7 469 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 ACOXLQ9NUZ1 547 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 UBAP1Q9NZ09 502 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 RNF7Q9UBF6 113 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 LPAR3Q9UBY5 353 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 MRM2Q9UI43 246 aaKnown RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 KCNS2Q9ULS6 477 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 EXOGQ9Y2C4 368 aaKnown RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 NPTNQ9Y639 398 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 CACNG2Q9Y698 323 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms