RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 OR2G2Q8NGZ5 317 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 TRMT10AQ8TBZ6 339 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 UBASH3BQ8TF42 649 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 CCL17Q92583 94 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 RPL3LQ92901 407 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 SPSB4Q96A44 273 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 MBD6Q96DN6 1003 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 SEH1LQ96EE3 360 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM80Q96HE8 168 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 MEGF10Q96KG7 1140 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 OR2V2Q96R30 315 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5M11Q96RB7 305 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 MNTQ99583 582 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF184Q99676 751 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 FOXC2Q99958 501 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 PDCD1LG2Q9BQ51 273 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 SLC30A2Q9BRI3 323 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 ADAT1Q9BUB4 502 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 REPIN1Q9BWE0 567 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 BPESC1Q9GZL8 116 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 MS4A5Q9H3V2 200 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 GSX1Q9H4S2 264 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 SAP30LQ9HAJ7 183 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 FGF20Q9NP95 211 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF275Q9NSD4 429 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM100Q9NV29 134 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 MRPS18AQ9NVS2 196 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 NUFIP1Q9UHK0 495 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 EDARQ9UNE0 448 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 DIMT1Q9UNQ2 313 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 PIGLQ9Y2B2 252 aa3.9□□□□□ -1.79
CHMP4A-202ENST00000524955 PTPN13Q12923 2485 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SPTAN1Q13813 2472 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RAI1Q7Z5J4 1906 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 IGHV3OR15-7A0A075B7D8 119 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 IGHV4-61A0A0C4DH41 118 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 TRBV2A0A0J9YWF9 115 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 A0A1B0GVI7 797 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 LOC107986453A0A1B0GWG9 222 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM230AA0A1W2PPH8 454 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 hCG_1807616A0A1W2PRN6 198 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ISPDA4D126 451 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 EFCAB10A6NFE3 127 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 A6NLC8 198 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR4C45A6NMZ5 311 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ANKRD30BLA7E2S9 258 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MYL12BO14950 172 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 PPIHO43447 177 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SYT7O43581 403 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RP2O75695 350 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SULT1C4O75897 302 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ZFPL1O95159 310 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 APOC1P02654 83 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MT-ND5P03915 603 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CDK1P06493 297 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ERCC1P07992 297 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 TACSTD2P09758 323 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 HSMCR30P0CW71 290 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 EGR1P18146 543 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MYL12AP19105 171 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CRHBPP24387 322 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 DCKP27707 260 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CD80P33681 288 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 THBS2P35442 1172 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 GNALP38405 381 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MAP2K3P46734 347 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 HSPA13P48723 471 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 PDLIM4P50479 330 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MMP16P51512 607 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 GPM6AP51674 278 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 GBX2P52951 348 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ACTA2P62736 377 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ACTG2P63267 376 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ALKBH1Q13686 389 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MED22Q15528 200 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 MOGQ16653 247 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 PLCXD3Q63HM9 321 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SFRP4Q6FHJ7 346 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CLEC2AQ6UVW9 174 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RHOUQ7L0Q8 258 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ANGPTL5Q86XS5 388 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 KLHL36Q8N4N3 616 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 DEFB108BQ8NET1 73 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SEMA6DQ8NFY4 1073 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR52H1Q8NGJ2 320 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR13C3Q8NGS6 347 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR14K1Q8NGZ2 314 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR13G1Q8NGZ3 307 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR8S1Q8NH09 359 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5AK2Q8NH90 309 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 C10orf105Q8TEF2 133 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 HPSE2Q8WWQ2 592 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 NEU4Q8WWR8 484 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RGP1Q92546 391 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM168AQ92567 244 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RDH5Q92781 318 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 FGGYQ96C11 551 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms