RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CA10Q9NS85 328 aa13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 ZNF275Q9NSD4 429 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 FZR1Q9UM11 496 aa13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 PIGLQ9Y2B2 252 aa13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 PRR14LQ5THK1 2151 aa13.61□□□□□ -0.23
TSPAN4-213ENST00000524895 TENM4Q6N022 2769 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 SPTBN1Q01082 2364 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 A0A1W2PPK0 400 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 ARL6IP5O75915 188 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 GABARAPO95166 117 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 FAHP16930 419 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 ACKR3P25106 362 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 LOXP28300 417 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 GNALP38405 381 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 MPV17P39210 176 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 MBNL2Q5VZF2 373 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 C22orf42Q6IC83 251 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 OR2T2Q6IF00 324 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 SLC16A12Q6ZSM3 486 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 Q6ZSR3 168 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 FTMTQ8N4E7 242 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 CSNK2A3Q8NEV1 391 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 SYNPRQ8TBG9 265 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 RAB2BQ8WUD1 216 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 ITFG2Q969R8 447 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 FGGYQ96C11 551 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 ZNF442Q9H7R0 627 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 NOX4Q9NPH5 578 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 BATF3Q9NR55 127 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 TXNL4BQ9NX01 149 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 NDUFA13Q9P0J0 144 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 CKLFQ9UBR5 152 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 GSTK1Q9Y2Q3 226 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 CMAHPQ9Y471 501 aa13.6□□□□□ -0.23
TSPAN4-213ENST00000524895 TRBV5-7A0A0A0MS05 114 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 A6NIN4 97 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 A6NNC1 897 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 CD300LBA8K4G0 201 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 VSTM5A8MXK1 200 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 TIMM8AO60220 97 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 RAF1P04049 648 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 UCHL1P09936 223 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 FGF9P31371 208 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 DDOSTP39656 456 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 TMBIM6P55061 237 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 KLF3P57682 345 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 SELENOVP59797 346 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 PSG7Q13046 419 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 DAZAP2Q15038 168 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 HSD17B12Q53GQ0 312 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 FAM27D1Q5T7N8 215 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 ZBTB37Q5TC79 503 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 UNQ9370/PRO34162Q6UXP9 181 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 BHLHE23Q8NDY6 225 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 ZNF420Q8TAQ5 688 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 PHYHIPQ92561 330 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 C10orf35Q96D05 121 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 HAVCR1Q96D42 359 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 DUSP13Q9UII6 198 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 CEPT1Q9Y6K0 416 aa13.59□□□□□ -0.23
TSPAN4-213ENST00000524895 LRRK2Q5S007 2527 aa13.58□□□□□ -0.23
TSPAN4-213ENST00000524895 ZNF816-ZNF321PA0A0X1KG74 233 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 GOSR1O95249 250 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 PLAUP00749 431 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 COX6B1P14854 86 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 ZNF250P15622 560 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 MYL9P24844 172 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 TNK1Q13470 666 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 CTF1Q16619 201 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 OR5AS1Q8N127 324 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 PARP16Q8N5Y8 322 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 PP6455Q8WZ26 134 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 NEUROG1Q92886 237 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 ISOC1Q96CN7 298 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 KCTD7Q96MP8 289 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 SYT3Q9BQG1 590 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 RBM38Q9H0Z9 239 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-213ENST00000524895 A0A1W2PPW3 197 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 ANKRD61A6NGH8 418 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 ANKRD30BLA7E2S9 258 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 IQCF6A8MYZ5 107 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 E7EQL1 145 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 PIN1P1O15428 100 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 OR4A8P0C604 315 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 KITLGP21583 273 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 VBP1P61758 197 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 NCS1P62166 190 aa13.57□□□□□ -0.24
TSPAN4-213ENST00000524895 PPP3R1P63098 170 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms