RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CHMP1AQ9HD42 196 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 TAS2R3Q9NYW6 316 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 C5orf51A6NDU8 294 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 F5H0A9 414 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 RAD51DO75771 328 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 GP1BAP07359 652 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 HCKP08631 526 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SFTPDP35247 375 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SERPINF1P36955 418 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF239Q16600 458 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM128Q5BJH2 165 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 VAX1Q5SQQ9 334 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 FAM57BQ71RH2 274 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 DOK3Q7L591 496 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SLC22A8Q8TCC7 542 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 CYYR1Q96J86 154 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ZC3H10Q96K80 434 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ARPC5LQ9BPX5 153 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 CRB3Q9BUF7 120 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 NMES1Q9C002 83 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 RARRES3Q9UL19 164 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 C13orf42A0A1B0GVH6 325 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF726A6NNF4 738 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 NUPL2O15504 423 aaKnown RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 KCNAB3O43448 404 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 CRTAPO75718 401 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 KLK2P20151 261 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 PNLIPRP3Q17RR3 467 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM176BQ3YBM2 270 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ACTBL2Q562R1 376 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 LCN10Q6JVE6 187 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM17Q86X19 198 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF283Q8N7M2 679 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 WDSUB1Q8N9V3 476 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OR52H1Q8NGJ2 320 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 SPACA9Q96E40 222 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ARHGAP5-AS1Q96IT6 56 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 RASL10BQ96S79 203 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 GPER1Q99527 375 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 C5orf66Q9H5L9 145 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 CSAG2Q9Y5P2 127 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 IGKV1-9A0A0C4DH69 117 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 AQP7P3A6NL99 342 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 E9PLN8 166 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 MFNGO00587 321 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 SIGLEC5O15389 551 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 DKK1O94907 266 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 ONECUT2O95948 504 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 NPY4RP50391 375 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 GRB2P62993 217 aaKnown RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 SIGLEC14Q08ET2 396 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 GUSBP11Q6P575 273 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 UNQ6126/PRO20091Q6UXV3 157 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 SPEM1Q8N4L4 309 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 FADS6Q8N9I5 356 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM185AQ8NFB2 350 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 BPIFCQ8NFQ6 507 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OR4K17Q8NGC6 315 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OR5AP2Q8NGF4 316 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OR56B1Q8NGI3 324 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 OR14K1Q8NGZ2 314 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 SLC25A43Q8WUT9 341 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM230Q96A57 120 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 DEFB126Q9BYW3 111 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 FAM117AQ9C073 453 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 HDGFL3Q9Y3E1 203 aa9.77□□□□□ -0.85
HDAC9-228ENST00000524023 WDFY3Q8IZQ1 3526 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 LOC102725191A0A1B0GVB3 256 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 A0A1W2PQM1 296 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 PGAM2P15259 253 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 PNLIPP16233 465 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 CTRB1P17538 263 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 CCL7P80098 99 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 FAM189A2Q15884 450 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 MYO7BQ6PIF6 2116 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 TDHQ8IZJ6 230 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 ARMC10Q8N2F6 343 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 DCUN1D4Q92564 292 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 PIK3IP1Q96FE7 263 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 URM1Q9BTM9 101 aaKnown RBP9.76□□□□□ -0.85
HDAC9-228ENST00000524023 RNF126Q9BV68 326 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF416Q9BWM5 594 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 C19orf25Q9UFG5 118 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-228ENST00000524023 RTTNQ86VV8 2226 aa9.76□□□□□ -0.85
HDAC9-228ENST00000524023 IGHV5-10-1A0A0J9YXX1 117 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 C5orf63A6NC05 138 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 F8VVB4 439 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 F8VWA3 439 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 SFT2D2O95562 160 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 ADH6P28332 368 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms