RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 PITPNC1Q9UKF7 332 aa7.56□□□□□ -1.2
PTPN12-216ENST00000523952 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
PTPN12-216ENST00000523952 PTBP3O95758 552 aaKnown RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 LHBP01229 141 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 HLA-DQA2P01906 255 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CHRM2P08172 466 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 PAX6P26367 422 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CRABP1P29762 137 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 GPR4P46093 362 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 SLC7A2P52569 658 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 PRKCDQ05655 676 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 NFYCQ13952 458 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 MPP2Q14168 576 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 SELPLGQ14242 412 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 VMACQ2NL98 169 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 SLC36A3Q495N2 470 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 ZBED5Q49AG3 693 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 ZNF730Q6ZMV8 503 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 COLCA1Q6ZS62 124 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CCDC121Q6ZUS5 278 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CCDC80Q76M96 950 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 MAVSQ7Z434 540 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 TSEN54Q7Z6J9 526 aaKnown RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 ADCK1Q86TW2 530 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 NAA40Q86UY6 237 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 LINC00346Q8IVM7 164 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 FAM185AQ8N0U4 392 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 OR5T2Q8NGG2 359 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 OR2AE1Q8NHA4 323 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 C17orf50Q8WW18 174 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 TNFRSF14Q92956 283 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 C12orf43Q96C57 262 aaKnown RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 TPD52L3Q96J77 140 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 PRRC1Q96M27 445 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 CGREF1Q99674 301 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 NUAK2Q9H093 628 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 NMNAT1Q9HAN9 279 aaPredicted RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 RNPEPL1Q9HAU8 725 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 NKIRAS1Q9NYS0 192 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 ZNF391Q9UJN7 358 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 N6AMT1Q9Y5N5 214 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 TSSC4Q9Y5U2 329 aaPredicted RBP7.55□□□□□ -1.2
PTPN12-216ENST00000523952 LHFPL6Q9Y693 200 aa7.55□□□□□ -1.2
PTPN12-216ENST00000523952 hCG_1809904A0A1W2PP81 198 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 A0A1W2PPE2 198 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 A0A1W2PPH5 198 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 A0A1W2PR64 198 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 A0A1W2PRV1 198 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 M0R135 149 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 TIPRLO75663 272 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 TROVE2P10155 538 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN12-216ENST00000523952 GNALP38405 381 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 MDH1P40925 334 aaKnown RBP7.54□□□□□ -1.2
PTPN12-216ENST00000523952 MRPL19P49406 292 aaKnown RBP7.54□□□□□ -1.2
PTPN12-216ENST00000523952 HIST1H3AP68431 136 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 ELF3P78545 371 aaPredicted RBP7.54□□□□□ -1.2
PTPN12-216ENST00000523952 ZNF92Q03936 586 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 TRAM2Q15035 370 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 HIST2H3PS2Q5TEC6 136 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 GPR139Q6DWJ6 353 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 CRIP3Q6Q6R5 217 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 EPGNQ6UW88 154 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 DLEU7Q6UYE1 221 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 CFAP77Q6ZQR2 320 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 HIST2H3AQ71DI3 136 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 PIGWQ7Z7B1 504 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 TMEM219Q86XT9 240 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 SDR9C7Q8NEX9 313 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 OR56B2PQ8NGI1 322 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 RPS4Y2Q8TD47 263 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 ZBTB9Q96C00 473 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 ZNF799Q96GE5 643 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 CDCA4Q9BXL8 241 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 DNTTIP1Q9H147 329 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 RABEP2Q9H5N1 569 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 KAT8Q9H7Z6 458 aaKnown RBP7.54□□□□□ -1.2
PTPN12-216ENST00000523952 HEXA-AS1Q9H8Q6 139 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 SNTG1Q9NSN8 517 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 HAO2Q9NYQ3 351 aa7.54□□□□□ -1.2
PTPN12-216ENST00000523952 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 TMEM120BA0PK00 339 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 MEGF11A6BM72 1044 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 NDUFB2O95178 105 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 RENP00797 406 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 SELLP14151 372 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 COX7A1P24310 79 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 GABRA2P47869 451 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 TGM4P49221 684 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 RPS6KA3P51812 740 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 CAPZA1P52907 286 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 SLC18A1P54219 525 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 TAF13Q15543 124 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 RFX4Q33E94 735 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 LRRC23Q53EV4 343 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-216ENST00000523952 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
PTPN12-216ENST00000523952 KCTD18Q6PI47 426 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms