RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 NPIPA8P0DM63 369 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GFAPP14136 432 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CD1DP15813 335 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF12P17014 697 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DTYMKP23919 212 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CCKARP32238 428 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 KDELR2P33947 212 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CRYBB2P43320 205 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TTPAP49638 278 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 STC1P52823 247 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 AQP4P55087 323 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PKNOX1P55347 436 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CLDN18P56856 261 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 HILS1P60008 231 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ERVS71-1P61550 626 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SLC3A1Q07837 685 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SLC10A7Q0GE19 358 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DLG1Q12959 904 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CEACAM7Q14002 265 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GANABQ14697 944 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TAF1AQ15573 450 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TNXAQ16473 311 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 IMPG1Q17R60 797 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GGTA1PQ4G0N0 100 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SFT2D3Q587I9 215 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF678Q5SXM1 525 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 LIPJQ5W064 366 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF474Q6S9Z5 364 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DCDC5Q6ZRR9 648 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TMPRSS11FQ6ZWK6 438 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PGAP1Q75T13 922 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ARPINQ7Z6K5 226 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ISCA2Q86U28 154 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 LHFPL3Q86UP9 236 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SATL1Q86VE3 508 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 RANBP3LQ86VV4 465 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PTOV1Q86YD1 416 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 LAS2Q8IYD9 372 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SYS1Q8N2H4 156 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DNAJC22Q8N4W6 341 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CSNK1A1LQ8N752 337 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 C8orf31Q8N9H6 132 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 MFSD9Q8NBP5 474 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PAPD5Q8NDF8 572 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ACVR1CQ8NER5 493 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 GJC3Q8NFK1 279 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 OR1J2Q8NGS2 313 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 OR2L8Q8NGY9 312 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 OR6X1Q8NH79 312 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ARRDC2Q8TBH0 407 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 MCOLN3Q8TDD5 553 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TAF15Q92804 592 aaKnown RBP eCLIP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 CPNE4Q96A23 557 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TADA1Q96BN2 335 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PPWD1Q96BP3 646 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PYCR2Q96C36 320 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 FBXL8Q96CD0 374 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 MTERF3Q96E29 417 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PELI1Q96FA3 418 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DCUN1D1Q96GG9 259 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 DNAJC1Q96KC8 554 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF354BQ96LW1 612 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 MACROD1Q9BQ69 325 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NICN1Q9BSH3 213 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 YTHDF1Q9BYJ9 559 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 Q9N2K0 584 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NLE1Q9NVX2 485 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NECAP2Q9NVZ3 263 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 ASB6Q9NWX5 421 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PTTG2Q9NZH5 202 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TMEM181Q9P2C4 612 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 EIF3KQ9UBQ5 218 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 SLC2A6Q9UGQ3 507 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 NXT1Q9UKK6 140 aaKnown RBP4.38□□□□□ -1.71
PABPC1-223ENST00000523636 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 TMED7Q9Y3B3 224 aa4.38□□□□□ -1.71
PABPC1-223ENST00000523636 PPIAL4CA0A0B4J2A2 164 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 PRSS51A0A1B0GVH4 220 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 TCRBV3S1A0A5B6 114 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 SH3PXD2BA1X283 911 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 CCDC160A6NGH7 325 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 EEF1E1-BLOC1S5C9J1V9 151 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 F8VVB4 439 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 F8VWA3 439 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 M0QXV9 152 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 CDC7O00311 574 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 CLOCKO15516 846 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 EEF1E1O43324 174 aaKnown RBP4.37□□□□□ -1.71
PABPC1-223ENST00000523636 NOS1APO75052 506 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-223ENST00000523636 NXPH2O95156 264 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 NDUFA7O95182 113 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 ACTL6AO96019 429 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 APOC1P02654 83 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 IFNA16P05015 189 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 PPIAL4GP0DN37 164 aa4.37□□□□□ -1.71
PABPC1-223ENST00000523636 HSD17B1P14061 328 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms