RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 FANK1Q8TC84 345 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SSX3Q99909 188 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 NPFFR1Q9GZQ6 430 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 TOR3AQ9H497 397 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 OPA3Q9H6K4 179 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 RNPEPL1Q9HAU8 725 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 CENPMQ9NSP4 180 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 KCNG2Q9UJ96 466 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SF3B6Q9Y3B4 125 aaKnown RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 ENPP4Q9Y6X5 453 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 IGLV1-36A0A0B4J1U3 117 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 H0YAE9 185 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 FXYD1O00168 92 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 DCTN6O00399 190 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 GMNNO75496 209 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 PTBP3O95758 552 aaKnown RBP9.43□□□□□ -0.9
MRPS28-206ENST00000520946 TXNDC12O95881 172 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 NDUFB7P17568 137 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 DDOSTP39656 456 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 KIR2DS4P43632 304 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 PRKXP51817 358 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 UBE2E1P51965 193 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 KLF10Q13118 480 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 PCK2Q16822 640 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 SNAI3Q3KNW1 292 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 KRTAP27-1Q3LI81 207 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 WDR38Q5JTN6 314 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 CBLL1Q75N03 491 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 LYG1Q8N1E2 194 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 FAM216BQ8N7L0 139 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 PROKR2Q8NFJ6 384 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 OR4F17Q8NGA8 305 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 OR5T2Q8NGG2 359 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 OR52J3Q8NH60 311 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 R3HDM4Q96D70 268 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 MED30Q96HR3 178 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 OR4F4Q96R69 305 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 METTL8Q9H825 291 aaKnown RBP9.43□□□□□ -0.9
MRPS28-206ENST00000520946 CYB5R1Q9UHQ9 305 aa9.43□□□□□ -0.9
MRPS28-206ENST00000520946 PRPF19Q9UMS4 504 aaKnown RBP9.43□□□□□ -0.9
MRPS28-206ENST00000520946 A0A1W2PRQ8 180 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 ANXA2P2A6NMY6 339 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 XRCC2O43543 280 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 ANGPTL7O43827 346 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 EDF1O60869 148 aaKnown RBP9.42□□□□□ -0.9
MRPS28-206ENST00000520946 FBXO24O75426 580 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 TIPRLO75663 272 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 LHBP01229 141 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
MRPS28-206ENST00000520946 PAICSP22234 425 aaKnown RBP9.42□□□□□ -0.9
MRPS28-206ENST00000520946 IFNGR2P38484 337 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 SLC15A1P46059 708 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 OMPP47874 163 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 LGALS4P56470 323 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 SMIM11AP58511 58 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 LIPEQ05469 1076 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 DGCR6Q14129 220 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 TIGD6Q17RP2 521 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 FGFRL1Q8N441 504 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 PNKDQ8N490 385 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 LY6G5BQ8NDX9 201 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 BEND2Q8NDZ0 799 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 C12orf43Q96C57 262 aaKnown RBP9.42□□□□□ -0.9
MRPS28-206ENST00000520946 MICU1Q9BPX6 476 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 DCTN5Q9BTE1 182 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 FN3KQ9H479 309 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 SP140LQ9H930 580 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 SLC25A10Q9UBX3 287 aaPredicted RBP9.42□□□□□ -0.9
MRPS28-206ENST00000520946 ZNF391Q9UJN7 358 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 MAB21L2Q9Y586 359 aa9.42□□□□□ -0.9
MRPS28-206ENST00000520946 PLXNB1O43157 2135 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 A0A1B0GW55 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 M0R1W7 72 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 ACOT8O14734 319 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 GLCEO94923 617 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 ANXA2P07355 339 aaKnown RBP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SPARCP09486 303 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L2P0CJ85 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L3P0CJ86 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L4P0CJ87 422 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L5P0CJ88 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L6P0CJ89 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L7P0CJ90 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SLC2A1P11166 492 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 RHCEP18577 417 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 HSD11B1P28845 292 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 EFNB2P52799 333 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DLX1P56177 255 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SF3A3Q12874 501 aaKnown RBP eCLIP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SNCBQ16143 134 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 LRRC75BQ2VPJ9 315 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms