RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 OMGP23515 440 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 CDAP32320 146 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 WNT5AP41221 380 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 MMP15P51511 669 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 EFNB1P98172 346 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 SLC3A1Q07837 685 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 SCARB2Q14108 478 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 SGCAQ16586 387 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 ZNF74Q16587 644 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 PABPC1L2AQ5JQF8 200 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 TMEM255AQ5JRV8 349 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 KLF17Q5JT82 389 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 PAGE3Q5JUK9 113 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 TTC33Q6PID6 262 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 RANBP3LQ86VV4 465 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 RBM45Q8IUH3 476 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 ARMC8Q8IUR7 673 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 MSRB3Q8IXL7 192 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 DEFB108BQ8NET1 73 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 AKR7LQ8NHP1 331 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 SLC25A40Q8TBP6 338 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 GEMIN6Q8WXD5 167 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 HIST1H2ACQ93077 130 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 POP5Q969H6 163 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 MAELQ96JY0 434 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 C1orf147Q96MC9 270 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 UHRF2Q96PU4 802 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 ZNF607Q96SK3 696 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 GPA33Q99795 319 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 TMEM43Q9BTV4 400 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 OR2J1Q9GZK6 312 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 EGLN1Q9GZT9 426 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 KCNN2Q9H2S1 579 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 CCNB1IP1Q9NPC3 277 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 NANSQ9NR45 359 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 SDR39U1Q9NRG7 319 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 PLEK2Q9NYT0 353 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 EIF3KQ9UBQ5 218 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 PURGQ9UJV8 347 aaKnown RBP4.85□□□□□ -1.63
PABPC1-216ENST00000520868 NPTNQ9Y639 398 aa4.85□□□□□ -1.63
PABPC1-216ENST00000520868 LOC100509620A0A075B734 347 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 C5orf49A4QMS7 147 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 PRORSD1PA6NEY8 169 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 GAGE10A6NGK3 116 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 EVPLLA8MZ36 301 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 M0QX08 132 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 SNNO75324 88 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 TRMUO75648 421 aaKnown RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 MFN2O95140 757 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 GAS8-AS1O95177 125 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 LYPD3O95274 346 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 SLC2A10O95528 541 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 NGFP01138 241 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 IGHG1P01857 330 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 OPN1SWP03999 348 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 THY1P04216 161 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 IGHV4-38-2P0DP08 117 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ANOS1P23352 680 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 STOMP27105 288 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 GDI2P50395 445 aaKnown RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ARL16Q0P5N6 197 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ZNF154Q13106 437 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 SLC9A3R2Q15599 337 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 NPTX1Q15818 432 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 DUSP7Q16829 419 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 LEG1Q6P5S2 330 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ZNF613Q6PF04 617 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 FOXL2NBQ6ZUU3 175 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 RRM2BQ7LG56 351 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 NANOGNBQ7Z5D8 188 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 DPPA2Q7Z7J5 298 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 FUNDC1Q8IVP5 155 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ZNF101Q8IZC7 436 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 OR4D11Q8NGI4 311 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 OR52E2Q8NGJ4 325 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 OR6T1Q8NGN1 323 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 VANGL1Q8TAA9 524 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 KLF14Q8TD94 323 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 NSMAFQ92636 917 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 TRIM44Q96DX7 344 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 ARHGDIGQ99819 225 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 IKZF5Q9H5V7 419 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 SIAEQ9HAT2 523 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 PATZ1Q9HBE1 687 aaKnown RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 TNFRSF19Q9NS68 423 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 TMEM106BQ9NUM4 274 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 CCDC167Q9P0B6 97 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 VAPAQ9P0L0 249 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 KLHL21Q9UJP4 597 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 SLC7A7Q9UM01 511 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 INSIG2Q9Y5U4 225 aa4.84□□□□□ -1.63
PABPC1-216ENST00000520868 V9GYY5 206 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-216ENST00000520868 VWFP04275 2813 aa4.83□□□□□ -1.64
PABPC1-216ENST00000520868 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
PABPC1-216ENST00000520868 PPIAL4EA0A075B759 164 aa4.83□□□□□ -1.64
PABPC1-216ENST00000520868 IGKV1D-43A0A0B4J1Z2 117 aa4.83□□□□□ -1.64
PABPC1-216ENST00000520868 PPIAL4CA0A0B4J2A2 164 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms