RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 VASH2Q86V25 355 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CCDC28AQ8IWP9 274 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 GALNT16Q8N428 558 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CMSS1Q9BQ75 279 aaKnown RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 PRMT8Q9NR22 394 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 PCDHB16Q9NRJ7 776 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CYB5R1Q9UHQ9 305 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MEMO1Q9Y316 297 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 TRAF3IP2O43734 574 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 CD46P15529 392 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CPT2P23786 658 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SSPNQ14714 243 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 COL19A1Q14993 1142 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 TMEM255AQ5JRV8 349 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ELP2Q6IA86 826 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MARCH1Q8TCQ1 289 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SEH1LQ96EE3 360 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 GFI1Q99684 422 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CHST6Q9GZX3 395 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 PARPBPQ9NWS1 579 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 KCNIP3Q9Y2W7 256 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 C7orf66A4D0T2 115 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 M0R296 226 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SERPINA7P05543 415 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 COX6A1P12074 109 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MGMTP16455 207 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 OPRM1P35372 400 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CCL11P51671 97 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ATP1B3P54709 279 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 KISS1Q15726 138 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MOGAT2Q3SYC2 334 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CLVS2Q5SYC1 327 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 POC1BQ8TC44 478 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CPT1CQ8TCG5 803 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 DCUN1D4Q92564 292 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ZFP64Q9NPA5 681 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 LHFPL6Q9Y693 200 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SNRPGP15A8MWD9 76 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SPRY1O43609 319 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 EFNA2O43921 213 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MT-CO3P00414 261 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 PGA4P0DJD7 388 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 PGA3P0DJD8 388 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ZNF32P17041 273 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 S100A11P31949 105 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 MLF1P58340 268 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ARL6IP1Q15041 203 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ZNF468Q5VIY5 522 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 NAXDQ8IW45 347 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 OR6S1Q8NH40 331 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ST7LQ8TDW4 575 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 REEP6Q96HR9 211 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 FOXB1Q99853 325 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 SLC17A5Q9NRA2 495 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 TIMM10BQ9Y5J6 103 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 ZNHIT1O43257 154 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ALX3O95076 343 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SRD5A2P31213 254 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SCAND1P57086 179 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SEC61A1P61619 476 aaKnown RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 PDCD1Q15116 288 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ZNF684Q5T5D7 378 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SLC25A24Q6NUK1 477 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ZNF565Q8N9K5 539 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 KCNE4Q8WWG9 221 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ARHGAP5-AS1Q96IT6 56 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 FER1L6-AS2Q96M78 137 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ZNF230Q9UIE0 474 aaPredicted RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 CHCHD2Q9Y6H1 151 aaPredicted RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 TRANK1O15050 2925 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 A0A1W2PP11 408 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ZNF814B7Z6K7 855 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ZNF587BE7ETH6 402 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SULT1C2O00338 296 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 TSPAN4O14817 238 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 RGS11O94810 467 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 AVPR2P30518 371 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 CBX5P45973 191 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 RAC3P60763 192 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 DEFA5Q01523 94 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 EXOSC2Q13868 293 aaKnown RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 OR1C1Q15619 314 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 TEX30Q5JUR7 227 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 CNEP1R1Q8N9A8 125 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 TMEM229BQ8NBD8 167 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 OR52H1Q8NGJ2 320 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ABHD3Q8WU67 409 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 WDR89Q96FK6 387 aaPredicted RBP8.98□□□□□ -0.97
MCF2-209ENST00000520602 NICN1Q9BSH3 213 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 ALPK3Q96L96 1907 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 IGHV3-64DA0A0J9YX35 117 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SOCS1O15524 211 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 HSPA12AO43301 675 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 PRKACBP22694 351 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 AIMP2Q13155 320 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms