RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PLEKHN1Q494U1 663 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 CDNFQ49AH0 187 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 FAM69BQ5VUD6 431 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 DCAF12L2Q5VW00 463 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 EIF5AL1Q6IS14 154 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 CBLN3Q6UW01 205 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 SLC35D2Q76EJ3 337 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 TRAPPC6BQ86SZ2 158 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 SSC4DQ8WTU2 575 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 PTPMT1Q8WUK0 201 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 MITD1Q8WV92 249 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 AQP3Q92482 292 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ARL11Q969Q4 196 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ADIPOR1Q96A54 375 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 DDIT4LQ96D03 193 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 CLIP3Q96DZ5 547 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 WDR89Q96FK6 387 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 LMF1Q96S06 567 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 MAP3K3Q99759 626 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 VRK1Q99986 396 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF416Q9BWM5 594 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF471Q9BX82 626 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 WWTR1Q9GZV5 400 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF768Q9H5H4 540 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 PCDHB16Q9NRJ7 776 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 LANCL2Q9NS86 450 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 FBLN5Q9UBX5 448 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 RARRES3Q9UL19 164 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 MKL2Q9ULH7 1088 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 CLDN16Q9Y5I7 305 aa7.67□□□□□ -1.18
CTNNA1-223ENST00000520520 LRRK2Q5S007 2527 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 IGKV3D-11A0A0A0MRZ8 115 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 TRAV14DV4A0A0A6YYC5 116 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 A0A0B4J2A0 478 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 IGHV5-51A0A0C4DH38 117 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 A0A1B0GTH9 108 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 TMEM269A0A1B0GVZ9 245 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 TCRBV16S1A1N1A0A5B0 115 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MEIS3P1A6NDR6 274 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ANKUB1A6NFN9 424 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ATP6V1G2-DDX39BF2Z307 99 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 H0YC42 278 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 M0QYG6 137 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PLPP3O14495 311 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 NPIPB7O75200 414 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 DDAH2O95865 285 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PLGP00747 810 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 APOC3P02656 99 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 RLN2P04090 185 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 FOLR1P15328 257 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 GNALP38405 381 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 APOBEC1P41238 236 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 GABRA4P48169 554 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 NAAAQ02083 359 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 OC90Q02509 493 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 IL11RAQ14626 422 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PNLIPRP3Q17RR3 467 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PAN3Q58A45 887 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 POMZP3Q6PJE2 187 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 CFAP77Q6ZQR2 320 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MOB3CQ70IA8 216 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PGAP1Q75T13 922 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 FJX1Q86VR8 437 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SPAG16Q8N0X2 631 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SVBPQ8N300 66 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 GALNT16Q8N428 558 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ARRDC1Q8N5I2 433 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 METTL27Q8N6F8 245 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 CHST4Q8NCG5 386 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SLC26A10Q8NG04 563 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 OR4D10Q8NGI6 311 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 OR1N1Q8NGS0 311 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MFSD8Q8NHS3 518 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 STOML3Q8TAV4 291 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF721Q8TF20 911 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ASB10Q8WXI3 467 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 DVL3Q92997 716 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MR1Q95460 341 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 AMELYQ99218 206 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 PTDSS2Q9BVG9 487 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 TINAGL1Q9GZM7 467 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MRPL22Q9NWU5 206 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 ALKBH4Q9NXW9 302 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 COQ3Q9NZJ6 369 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SHPKQ9UHJ6 478 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 GDF2Q9UK05 429 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SLC22A13Q9Y226 551 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 FARSAQ9Y285 508 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 SLC5A6Q9Y289 635 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 MEMO1Q9Y316 297 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 EMC9Q9Y3B6 208 aa7.66□□□□□ -1.18
CTNNA1-223ENST00000520520 A0A1W2PNV4 684 aa7.65□□□□□ -1.18
CTNNA1-223ENST00000520520 C9orf170A2RU37 121 aa7.65□□□□□ -1.18
CTNNA1-223ENST00000520520 F5H0A9 414 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-223ENST00000520520 ABCD4O14678 606 aa7.65□□□□□ -1.18
CTNNA1-223ENST00000520520 ZNF208O43345 1280 aa7.65□□□□□ -1.18
CTNNA1-223ENST00000520520 SRSF10O75494 262 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms