RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SLC26A10Q8NG04 563 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 PYURFQ96I23 114 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF582Q96NG8 517 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 ERMAPQ96PL5 475 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 NMNAT3Q96T66 252 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 SLC30A2Q9BRI3 323 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 C1QTNF5Q9BXJ0 243 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 HDHD2Q9H0R4 259 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 KRCC1Q9NPI7 259 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 DDX28Q9NUL7 540 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF69Q9UC07 566 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 SAMD4AQ9UPU9 718 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 POLR1DQ9Y2S0 133 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 AP4S1Q9Y587 144 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 AUP1Q9Y679 476 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 MGAM2Q2M2H8 2515 aa7.76□□□□□ -1.17
CTNNA1-221ENST00000520339 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 IQCF6A8MYZ5 107 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 H0YL77 283 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 MLNRO43193 412 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 FSTL3O95633 263 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ACSM4P0C7M7 580 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 HIST1H1CP16403 213 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 HOXB6P17509 224 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 FPR3P25089 353 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 SLC6A6P31641 620 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 CD80P33681 288 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 GGT2P36268 569 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 GSSP48637 474 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 CENPAP49450 140 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 SRP9P49458 86 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF181Q2M3W8 571 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ESCO2Q56NI9 601 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 SLC18B1Q6NT16 456 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 DNM1P34Q6PK57 102 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ADGRG5Q8IZF4 528 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 MUC20Q8N307 709 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 PRR18Q8N4B5 295 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZBTB34Q8NCN2 500 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 OR10AD1Q8NGE0 317 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 OR4K13Q8NH42 304 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 SGMS2Q8NHU3 365 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF420Q8TAQ5 688 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 DACT3Q96B18 629 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZMYND19Q96E35 227 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 C1orf147Q96MC9 270 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF48Q96MX3 618 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 DDOQ99489 341 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 OR52D1Q9H346 318 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 WDR76Q9H967 626 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 VCX3AQ9NNX9 186 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 PNRC2Q9NPJ4 139 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 TMEM100Q9NV29 134 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 ARMC1Q9NVT9 282 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 CYB5R1Q9UHQ9 305 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 PPIAL4AQ9Y536 164 aa7.75□□□□□ -1.17
CTNNA1-221ENST00000520339 IGHV3-64DA0A0J9YX35 117 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 OR6C68A6NDL8 312 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 F5H5P2 479 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 CASQ2O14958 399 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SPRY1O43609 319 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 IDH3BO43837 385 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 GADD45GO95257 159 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 CYB5R3P00387 301 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 RENP00797 406 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 HKR1P10072 659 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SELEP16581 610 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 PRTN3P24158 256 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 PEX2P28328 305 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SPIBQ01892 262 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 CD69Q07108 199 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 ECH1Q13011 328 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SLC36A3Q495N2 470 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 FAM98BQ52LJ0 330 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 ARMCX4Q5H9R4 360 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 FAM201AQ5SY85 155 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 TMEM200BQ69YZ2 307 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 LEG1Q6P5S2 330 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 RBMS3Q6XE24 437 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 CFAP77Q6ZQR2 320 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 NAA40Q86UY6 237 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 MOGAT3Q86VF5 341 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 KLBQ86Z14 1044 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 LINC00346Q8IVM7 164 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 FANK1Q8TC84 345 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 CANT1Q8WVQ1 401 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SLCO4A1Q96BD0 722 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 PITX2Q99697 317 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 TMEM246Q9BRR3 403 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 MRI1Q9BV20 369 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 ZNF747Q9BV97 191 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 VCXQ9H320 206 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 MRPL22Q9NWU5 206 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 OR5V1Q9UGF6 321 aa7.74□□□□□ -1.17
CTNNA1-221ENST00000520339 SCOCQ9UIL1 159 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms