RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PATE4P0C8F1 98 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 NR2F1P10589 423 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 UMPSP11172 480 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 NR2C1P13056 603 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 IRF2P14316 349 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 KITLGP21583 273 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 EEF1B2P24534 225 aaKnown RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 LMO1P25800 156 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PTBP1P26599 531 aaKnown RBP eCLIP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MPV17P39210 176 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PSMB10P40306 273 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PCP4P48539 62 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SRP9P49458 86 aaKnown RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 LUMP51884 338 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 CRISP3P54108 245 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 CLDN8P56748 225 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PPP1CBP62140 327 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MS4A2Q01362 244 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 EGFEM1PQ0D2K5 195 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 NFYCQ13952 458 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SYPL1Q16563 259 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PGS1Q32NB8 556 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 NSUN5P1Q3KNT7 163 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SPATA46Q5T0L3 261 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 OGFRL1Q5TC84 451 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SLC25A24Q6NUK1 477 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF836Q6ZNA1 936 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF101Q8IZC7 436 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 CLECL1Q8IZS7 167 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PQLC1Q8N2U9 271 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 Q8NFD4 153 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 OR4K5Q8NGD3 323 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 OR52P1PQ8NH57 321 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MUC7Q8TAX7 377 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ITLN1Q8WWA0 313 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PYDC1Q8WXC3 89 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 THRSPQ92748 146 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 LHX4Q969G2 390 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TMEM54Q969K7 222 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TAAR8Q969N4 342 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ERGIC1Q969X5 290 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 FAM162AQ96A26 154 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 POM121L2Q96KW2 1035 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 OR2V2Q96R30 315 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TBX15Q96SF7 602 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TMEM246Q9BRR3 403 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SLC35A5Q9BS91 424 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 C6orf62Q9GZU0 229 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PAIP1Q9H074 479 aaKnown RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 FAM234AQ9H0X4 552 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MMP28Q9H239 520 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TOR3AQ9H497 397 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 CCNB1IP1Q9NPC3 277 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ARMC1Q9NVT9 282 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 THUMPD1Q9NXG2 353 aaKnown RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SELENONQ9NZV5 590 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ERVK-18Q9QC07 812 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ABCD2Q9UBJ2 740 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 P2RX2Q9UBL9 471 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF443Q9Y2A4 671 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-207ENST00000520168 IFT52Q9Y366 437 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 KPTNQ9Y664 436 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 FRAS1Q86XX4 4008 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SHISA3A0PJX4 238 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PRORSD1PA6NEY8 169 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 C22orf46C9J442 243 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PRR23D1E9PI22 279 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 E9PI62 339 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 H0YAE9 185 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 H3BNX3 289 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 DENRO43583 198 aaKnown RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NDUFA2O43678 99 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 GMNNO75496 209 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR6A2O95222 327 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 CLIC3O95833 236 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 HPRP00739 348 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IGHG1P01857 330 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IFNW1P05000 195 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 MMP7P09237 267 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PGA4P0DJD7 388 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PGA3P0DJD8 388 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PRR23D2P0DMB1 279 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 THRBP10828 461 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 FCGR1AP12314 374 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IGLL1P15814 213 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PRKACAP17612 351 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SLC6A2P23975 617 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ARL3P36405 182 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 WNT5AP41221 380 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SLC7A2P52569 658 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RAD23AP54725 363 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 BIDP55957 195 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NME5P56597 212 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 UFM1P61960 85 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PSG7Q13046 419 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms