RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 DUS3LQ96G46 650 aaKnown RBP12.49□□□□□ -0.41
FBXO28-204ENST00000519894 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 MMADHCQ9H3L0 296 aaPredicted RBP12.49□□□□□ -0.41
FBXO28-204ENST00000519894 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 RNF7Q9UBF6 113 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 LRCH1Q9Y2L9 728 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
FBXO28-204ENST00000519894 hCG_38984A0A1B0GV85 526 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 RGS9O75916 674 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 ALOX5APP20292 161 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 SMCPP49901 116 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 HCCSP53701 268 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 PAX2Q02962 417 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 APOFQ13790 326 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 LYPD2Q6UXB3 125 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 ZNF418Q8TF45 676 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 NEIL1Q96FI4 390 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 PGAM5Q96HS1 289 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 TEAD3Q99594 435 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 SSBP3Q9BWW4 388 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-204ENST00000519894 OR10A2Q9H208 303 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 FN3KRPQ9HA64 309 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
FBXO28-204ENST00000519894 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 PRKYO43930 277 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 GRPP07492 148 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 FASP25445 335 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 GSK3AP49840 483 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 ESRRGP62508 458 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 GNB2P62879 340 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 PAX8Q06710 450 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 SFRP4Q6FHJ7 346 aaPredicted RBP12.47□□□□□ -0.41
FBXO28-204ENST00000519894 LRRN1Q6UXK5 716 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 ZNF841Q6ZN19 808 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 DCDC5Q6ZRR9 648 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 OR8B3Q8NGG8 313 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 DACT3Q96B18 629 aaPredicted RBP12.47□□□□□ -0.41
FBXO28-204ENST00000519894 OR8B2Q96RD0 313 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 C1orf123Q9NWV4 160 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 OR5V1Q9UGF6 321 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 AUP1Q9Y679 476 aa12.47□□□□□ -0.41
FBXO28-204ENST00000519894 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 G3V2T6 193 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 LGALS8O00214 317 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 TNFRSF13BO14836 293 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 CFL1P23528 166 aaKnown RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 EPHA2P29317 976 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 CD80P33681 288 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 PSMB10P40306 273 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 HILS1P60008 231 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 EFNB1P98172 346 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 MZT1Q08AG7 82 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 KLF17Q5JT82 389 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 KDM4DQ6B0I6 523 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 BCDIN3DQ7Z5W3 292 aaKnown RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 BOLLQ8N9W6 283 aaKnown RBP12.46□□□□□ -0.41
FBXO28-204ENST00000519894 LRTOMTQ8WZ04 291 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 LYZL4Q96KX0 146 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 SLC6A7Q99884 636 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 GABARAPL1Q9H0R8 117 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 NIPAL2Q9H841 368 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 C14orf119Q9NWQ9 140 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 LRP12Q9Y561 859 aa12.46□□□□□ -0.41
FBXO28-204ENST00000519894 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.42
FBXO28-204ENST00000519894 A6NLC8 198 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 ZAR1LA6NP61 321 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 LHBP01229 141 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 MRPL3P09001 348 aaKnown RBP12.45□□□□□ -0.42
FBXO28-204ENST00000519894 PITPNBP48739 271 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 PSMA6P60900 246 aaKnown RBP12.45□□□□□ -0.42
FBXO28-204ENST00000519894 OR8B8Q15620 311 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 TUSC1Q2TAM9 212 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 SLX4IPQ5VYV7 408 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 WDR25Q64LD2 544 aaPredicted RBP12.45□□□□□ -0.42
FBXO28-204ENST00000519894 C12orf73Q69YU5 71 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 NLRC3Q7RTR2 1065 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 GCSAMQ8N6F7 178 aa12.45□□□□□ -0.42
FBXO28-204ENST00000519894 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms