RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 NTM-AS1Q6ZSK4 140 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 MKXQ8IYA7 352 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TCAIMQ8N3R3 496 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 ARIH2OSQ8N7S6 290 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR6K2Q8NGY2 324 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR6N1Q8NGY5 312 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR51A7Q8NH64 312 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TMEM239Q8WW34 195 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 CDKL2Q92772 493 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 KCNS1Q96KK3 526 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 BMFQ96LC9 184 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZIM3Q96PE6 472 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 HINT2Q9BX68 163 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC17A9Q9BYT1 436 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 IFI27L2Q9H2X8 130 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 GOLPH3Q9H4A6 298 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 WDR55Q9H6Y2 383 aaPredicted RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TMEM27Q9HBJ8 222 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 VCX3AQ9NNX9 186 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 HMG20AQ9NP66 347 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DDX19AQ9NUU7 478 aaKnown RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 CHMP5Q9NZZ3 219 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 VAX2Q9UIW0 290 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 CFL2Q9Y281 166 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 HES2Q9Y543 173 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 UBIAD1Q9Y5Z9 338 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 NOTCH3Q9UM47 2321 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 TP53BP1Q12888 1972 aaPredicted RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 GOLGA8JA6NMD2 632 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 IQCF5A8MTL0 148 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 KRBOX1C9JBD0 128 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 RNASEK-C17orf49H0YIS7 233 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 M0R1B8 84 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PLPP3O14495 311 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 REM1O75628 298 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 GOLGA8HP0CJ92 632 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PSMC3P17980 439 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PCK1P35558 622 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 TNNC1P63316 161 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC35A1P78382 337 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 CRADDP78560 199 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 IFITM3Q01628 133 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 DYNC1I2Q13409 638 aaKnown RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PNOCQ13519 176 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 C16orf72Q14CZ0 275 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 KRT71Q3SY84 523 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 ACTL10Q5JWF8 245 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 C6orf183Q5T699 404 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 TSPO2Q5TGU0 170 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 BHLHA15Q7RTS1 189 aaPredicted RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC16A13Q7RTY0 426 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 WDR86Q86TI4 376 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SETD3Q86TU7 594 aaPredicted RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 LINC01551Q86U37 167 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 NKAIN4Q8IVV8 208 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC30A8Q8IWU4 369 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 C11orf53Q8IXP5 236 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 C17orf78Q8N4C9 275 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 ENKURQ8TC29 256 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 DYNLL2Q96FJ2 89 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 TIMM17AQ99595 171 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 HSD17B10Q99714 261 aaKnown RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 KCNS3Q9BQ31 491 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 ARV1Q9H2C2 271 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRORYQ9H606 182 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 PLEKHF2Q9H8W4 249 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 EDA2RQ9HAV5 297 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC7A11Q9UPY5 501 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 SIGLEC7Q9Y286 467 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 HYOU1Q9Y4L1 999 aa2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 TDRD6O60522 2096 aaKnown RBP2.13□□□□□ -2.07
RNU6-840P-201ENST00000517275 ARHGAP21Q5T5U3 1957 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 PTPRTO14522 1441 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 TMEM223A0PJW6 202 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF233A6NK53 670 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RSPH10B2B2RC85 870 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF207O43670 478 aaKnown RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 SC5DO75845 299 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 GLSO94925 669 aaPredicted RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 SMC2O95347 1197 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 TRBV12-3P01733 135 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 IGHV3-11P01762 117 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RPN2P04844 631 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC35G6P0C7Q6 338 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RSPH10BP0C881 870 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF823P16415 610 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 DEKP35659 375 aaKnown RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RPS9P46781 194 aaKnown RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 NOVP48745 357 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRLHRP49683 370 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 CCR6P51684 374 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF133P52736 654 aaPredicted RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RPL23P62829 140 aaKnown RBP2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 RAP1AP62834 184 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 CDK5Q00535 292 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 DMTNQ08495 405 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 SIGLEC14Q08ET2 396 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 SYCNQ0VAF6 134 aa2.12□□□□□ -2.07
RNU6-840P-201ENST00000517275 XRCC4Q13426 336 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms