RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 LCN2P80188 198 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 OR8B8Q15620 311 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
SERF1B-208ENST00000515588 DEGS2Q6QHC5 323 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 KLHL36Q8N4N3 616 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 ERGIC1Q969X5 290 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 OR8B4Q96RC9 309 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 RGCCQ9H4X1 137 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 NIPAL2Q9H841 368 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 PCDHB10Q9UN67 800 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 NOP16Q9Y3C1 178 aaKnown RBP13.2□□□□□ -0.3
SERF1B-208ENST00000515588 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 FSTL3O95633 263 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 WNT2P09544 360 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
SERF1B-208ENST00000515588 CXCR4P61073 352 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 KCTD18Q6PI47 426 aaPredicted RBP13.19□□□□□ -0.3
SERF1B-208ENST00000515588 KLBQ86Z14 1044 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 GID4Q8IVV7 300 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 SLC35F2Q8IXU6 374 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 MUC20Q8N307 709 aaPredicted RBP13.19□□□□□ -0.3
SERF1B-208ENST00000515588 CBR4Q8N4T8 237 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 C19orf18Q8NEA5 215 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 ASB17Q8WXJ9 295 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 APOL4Q9BPW4 351 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 TMEM246Q9BRR3 403 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 MROQ9BYG7 248 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 TMEM14AQ9Y6G1 99 aa13.19□□□□□ -0.3
SERF1B-208ENST00000515588 PPIAL4EA0A075B759 164 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 PPIAL4DF5H284 164 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ZNF254O75437 659 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 PNPP00491 289 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 GRPP07492 148 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 PPIAL4FP0DN26 164 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 HTR1FP30939 366 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 DCTDP32321 178 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 SRP14P37108 136 aaKnown RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ALDH3A2P51648 485 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ZIK1Q3SY52 487 aaPredicted RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ZNF404Q494X3 552 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ZNF322Q6U7Q0 402 aaPredicted RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 SSX6Q7RTT6 188 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 C11orf53Q8IXP5 236 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 C1orf87Q8N0U7 546 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 PLPP7Q8NBV4 271 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 OR11L1Q8NGX0 322 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 EME1Q96AY2 570 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 FGF23Q9GZV9 251 aaPredicted RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 MMP26Q9NRE1 261 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 CLN6Q9NWW5 311 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
SERF1B-208ENST00000515588 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 PPIAL4AQ9Y536 164 aa13.18□□□□□ -0.3
SERF1B-208ENST00000515588 A0A0G2JMP0 313 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 A0A0X1KG70 313 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 ACOD1A6NK06 481 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 A8MXK9 166 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 TRAPPC2LH3BP13 241 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 PHF1O43189 567 aaPredicted RBP13.17□□□□□ -0.3
SERF1B-208ENST00000515588 FOXH1O75593 365 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 APOL3O95236 402 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 IRF2P14316 349 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 THBS2P35442 1172 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 RIDAP52758 137 aaKnown RBP13.17□□□□□ -0.3
SERF1B-208ENST00000515588 DCAF12L2Q5VW00 463 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 OR4M2Q8NGB6 313 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 FAM81AQ8TBF8 368 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 MNTQ99583 582 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 SLC29A1Q99808 456 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 PAPOLGQ9BWT3 736 aaKnown RBP13.17□□□□□ -0.3
SERF1B-208ENST00000515588 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 C1orf123Q9NWV4 160 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 RNF7Q9UBF6 113 aa13.17□□□□□ -0.3
SERF1B-208ENST00000515588 OPN4Q9UHM6 478 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms