RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 RHCEP18577 417 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 ANOS1P23352 680 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 OTX1P32242 354 aaPredicted RBP12.9□□□□□ -0.34
LMNA-223ENST00000515459 SAA4P35542 130 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 Q8N7P7 452 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 MRAPQ8TCY5 172 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 FAM162AQ96A26 154 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 RCN3Q96D15 328 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 FN3KQ9H479 309 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 ADA2Q9NZK5 511 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 NDUFAF4Q9P032 175 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
LMNA-223ENST00000515459 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 DDOSTP39656 456 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 EFNB2P52799 333 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 DLX1P56177 255 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
LMNA-223ENST00000515459 KLRD1Q13241 179 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 IKZF1Q13422 519 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 LRRC10Q5BKY1 277 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 C1orf122Q6ZSJ8 110 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 DPY19L4Q7Z388 723 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 C11orf53Q8IXP5 236 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 SDR9C7Q8NEX9 313 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 OR4C15Q8NGM1 316 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 OR52J3Q8NH60 311 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 C8orf46Q8TAG6 207 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 CFHR4Q92496 578 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 C12orf43Q96C57 262 aaKnown RBP12.89□□□□□ -0.35
LMNA-223ENST00000515459 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 SIGLEC9Q9Y336 463 aa12.89□□□□□ -0.35
LMNA-223ENST00000515459 H3BUX3 64 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 NME4O00746 187 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 ACOT8O14734 319 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 XRCC2O43543 280 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 NAA10P41227 235 aaPredicted RBP12.88□□□□□ -0.35
LMNA-223ENST00000515459 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
LMNA-223ENST00000515459 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 UBE2E1P51965 193 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 LOXL3P58215 753 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 NCR3LG1Q68D85 454 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 WDR82Q6UXN9 313 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 WDR86Q86TI4 376 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 PNKDQ8N490 385 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 BEND2Q8NDZ0 799 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 OR4C13Q8NGP0 309 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 H1FXQ92522 213 aaKnown RBP12.88□□□□□ -0.35
LMNA-223ENST00000515459 TNFRSF14Q92956 283 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 FAM234AQ9H0X4 552 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 CAPN7Q9Y6W3 813 aa12.88□□□□□ -0.35
LMNA-223ENST00000515459 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
LMNA-223ENST00000515459 IDH3BO43837 385 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 TIPRLO75663 272 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 DIRAS1O95057 198 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 SLC2A1P11166 492 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 NCK1P16333 377 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 TGM4P49221 684 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 GSK3BP49841 420 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 PRKXP51817 358 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 SLC7A2P52569 658 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 CSNK2BP67870 215 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 KRT72Q14CN4 511 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 ATPAF1Q5TC12 328 aaPredicted RBP12.87□□□□□ -0.35
LMNA-223ENST00000515459 KLHDC1Q8N7A1 406 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 OR2T6Q8NHC8 308 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 SPSB4Q96A44 273 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 SEH1LQ96EE3 360 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 DHRS1Q96LJ7 313 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 SSX3Q99909 188 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 FUZQ9BT04 418 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 TOR3AQ9H497 397 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 MAB21L2Q9Y586 359 aa12.87□□□□□ -0.35
LMNA-223ENST00000515459 M0R1W7 72 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 SLC22A2O15244 555 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 XPNPEP2O43895 674 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 AMY2BP19961 511 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
LMNA-223ENST00000515459 SF3A3Q12874 501 aaKnown RBP eCLIP12.86□□□□□ -0.35
LMNA-223ENST00000515459 TAF13Q15543 124 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 OXLD1Q5BKU9 147 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 PGBD2Q6P3X8 592 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 DCXRQ7Z4W1 244 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 PROKR2Q8NFJ6 384 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 OR5T2Q8NGG2 359 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 OR9Q1Q8NGQ5 310 aa12.86□□□□□ -0.35
LMNA-223ENST00000515459 RP9Q8TA86 221 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms