RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PCDHB10Q9UN67 800 aa10.75□□□□□ -0.69
CLCN3-210ENST00000515420 DOCK11Q5JSL3 2073 aa10.75□□□□□ -0.69
CLCN3-210ENST00000515420 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 A0A0U1RQV5 110 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 A0A0X1KG70 313 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 A8MXK9 166 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 F5H0A9 414 aaPredicted RBP10.74□□□□□ -0.69
CLCN3-210ENST00000515420 J3QLI3 93 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 M0R129 80 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 EI24O14681 340 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 PLPP2O43688 288 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 FOXH1O75593 365 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 PNPP00491 289 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 MRPL3P09001 348 aaKnown RBP10.74□□□□□ -0.69
CLCN3-210ENST00000515420 SBK2P0C263 348 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 IRF2P14316 349 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 GSK3AP49840 483 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF829Q3KNS6 432 aaPredicted RBP10.74□□□□□ -0.69
CLCN3-210ENST00000515420 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF420Q8TAQ5 688 aaPredicted RBP10.74□□□□□ -0.69
CLCN3-210ENST00000515420 RFKQ969G6 155 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 HRASLS5Q96KN8 279 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 OR8B4Q96RC9 309 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 RIBC2Q9H4K1 309 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 FN3KRPQ9HA64 309 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 ADGRL4Q9HBW9 690 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 CLN6Q9NWW5 311 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 UBAP1Q9NZ09 502 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF319Q9P2F9 582 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 LRCH1Q9Y2L9 728 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 N6AMT1Q9Y5N5 214 aa10.74□□□□□ -0.69
CLCN3-210ENST00000515420 MXRA5Q9NR99 2828 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 KIAA1324LA8MWY0 1029 aaPredicted RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 E9PQ18 207 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF670-ZNF695F2Z2N8 137 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 HTR1FP30939 366 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 POLR2IP36954 125 aaKnown RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 PMELP40967 661 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 RIDAP52758 137 aaKnown RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 HCCSP53701 268 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 CXCR4P61073 352 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 EGR3Q06889 387 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 SCGB2A2Q13296 93 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF404Q494X3 552 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 SLC25A30Q5SVS4 291 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ZNF322Q6U7Q0 402 aaPredicted RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 KRT74Q7RTS7 529 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 BCDIN3DQ7Z5W3 292 aaKnown RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 SLC35F2Q8IXU6 374 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 OR8B12Q8NGG6 310 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 C9orf16Q9BUW7 83 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 MOB1AQ9H8S9 216 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 LPAR2Q9HBW0 351 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 S100A14Q9HCY8 104 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 BRD7Q9NPI1 651 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 TRIM36Q9NQ86 728 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 FAM206AQ9NX38 181 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.73□□□□□ -0.69
CLCN3-210ENST00000515420 RNF7Q9UBF6 113 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 MIOXQ9UGB7 285 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 PPIAL4AQ9Y536 164 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 MPC1Q9Y5U8 109 aa10.73□□□□□ -0.69
CLCN3-210ENST00000515420 ATRQ13535 2644 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 TMEM269A0A1B0GVZ9 245 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 CEACAM18A8MTB9 384 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 FAM20BO75063 409 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 CYB5R3P00387 301 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-210ENST00000515420 GNALP38405 381 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 IL5RAQ01344 420 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 MPPED2Q15777 294 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 KCNJ8Q15842 424 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 GFOD2Q3B7J2 385 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 PRAMEF6Q5VXH4 476 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 PQLC1Q8N2U9 271 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 OR8S1Q8NH09 359 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 PAPOLGQ9BWT3 736 aaKnown RBP10.72□□□□□ -0.69
CLCN3-210ENST00000515420 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 NUFIP1Q9UHK0 495 aaKnown RBP10.72□□□□□ -0.69
CLCN3-210ENST00000515420 IKZF2Q9UKS7 526 aa10.72□□□□□ -0.69
CLCN3-210ENST00000515420 SVEP1Q4LDE5 3571 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 ANXA2P2A6NMY6 339 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 ARHGAP32A7KAX9 2087 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 SRSF10O75494 262 aaKnown RBP10.71□□□□□ -0.69
CLCN3-210ENST00000515420 CST4P01036 141 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 IGLV3-1P01715 115 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 WNT2P09544 360 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 CFHR2P36980 270 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 SRP14P37108 136 aaKnown RBP10.71□□□□□ -0.69
CLCN3-210ENST00000515420 MAP2K3P46734 347 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 SNRPGP62308 76 aaKnown RBP10.71□□□□□ -0.69
CLCN3-210ENST00000515420 ZBTB37Q5TC79 503 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 DCAF12L2Q5VW00 463 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms