RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CRHP06850 196 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 DBIP07108 87 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 AGTR1P30556 359 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ACVR1BP36896 505 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CDKN2AP42771 156 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ARF1P84077 181 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 PSG6Q00889 435 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 MRPL2Q5T653 305 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 WDFY1Q8IWB7 410 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 POC1AQ8NBT0 407 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM52Q8NDY8 209 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 OR51A4Q8NGJ6 313 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ADAMTS15Q8TE58 950 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SF3B5Q9BWJ5 86 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SLCO5A1Q9H2Y9 848 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ZCCHC3Q9NUD5 404 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 HDGFL3Q9Y3E1 203 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TNRC6AQ8NDV7 1962 aaKnown RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 GON4LQ3T8J9 2241 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 C5orf58C9J3I9 102 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 PRR23D1E9PI22 279 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 J3QW42 95 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 DCTN6O00399 190 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 NPIPB7O75200 414 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 GPR75O95800 540 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 FABP1P07148 127 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 PRR23D2P0DMB1 279 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 GPX4P36969 197 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ALKBH1Q13686 389 aaKnown RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 C2orf76Q3KRA6 126 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 TP53I3Q53FA7 332 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 LYG2Q86SG7 212 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ODF3L1Q8IXM7 274 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 C1orf162Q8NEQ5 155 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ZCCHC10Q8TBK6 192 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF559Q9BR84 538 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ZMAT3Q9HA38 289 aaKnown RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 MED11Q9P086 117 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 YLPM1P49750 1951 aaKnown RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 A0A1W2PRV1 198 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 MKRN2OSH3BPM6 223 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 GOSR2O14653 212 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 SSNA1O43805 119 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 CD3DP04234 171 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 AKAIN1P0CW23 69 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 NTSP30990 170 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ATP1B3P54709 279 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 UBE2MP61081 183 aaKnown RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 SLC3A1Q07837 685 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 PJVKQ0ZLH3 352 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 UNC119Q13432 240 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 DEFB134Q4QY38 66 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 EIPR1Q53HC9 387 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 SAPCD1Q5SSQ6 148 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 H3F3CQ6NXT2 135 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 IGFL3Q6UXB1 125 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 DGAT2L6Q6ZPD8 337 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 PPP1R32Q7Z5V6 425 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 CENPVQ7Z7K6 275 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 CATSPERDQ86XM0 798 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 OR51S1Q8NGJ8 323 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 OR10AC1Q8NH08 325 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM41AQ96HV5 264 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 C4orf45Q96LM5 186 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 SLC6A7Q99884 636 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 TSPAN10Q9H1Z9 355 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 GPN1Q9HCN4 374 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 G6PC2Q9NQR9 355 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 SLC22A11Q9NSA0 550 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 VSX1Q9NZR4 365 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF629Q9UEG4 869 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-205ENST00000514271 PRODH2Q9UF12 536 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF780BQ9Y6R6 833 aa6.54□□□□□ -1.36
CLIP1-205ENST00000514271 IGHV1-45A0A0A0MS14 117 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CDC14CA4D256 554 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 RAB27BO00194 218 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 DIRAS3O95661 229 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SFTPBP07988 381 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 NR2F1P10589 423 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SOAT1P35610 550 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SULT1A2P50226 295 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 EMDP50402 254 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ANXA11P50995 505 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SUCLG1P53597 346 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SORDQ00796 357 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 DAZAP2Q15038 168 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 EMC4Q5J8M3 183 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 LRRN1Q6UXK5 716 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SZRD1Q7Z422 152 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ANKRD37Q7Z713 158 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ATG4DQ86TL0 474 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ARRDC1Q8N5I2 433 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 BHLHE23Q8NDY6 225 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 OR1J2Q8NGS2 313 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 EXOSC8Q96B26 276 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 GNRHR2Q96P88 292 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 DGAT2Q96PD7 388 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms