RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 APOC1P02654 83 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 PPIAL4FP0DN26 164 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 RPS2P15880 293 aaKnown RBP13.8□□□□□ -0.2
DDX41-213ENST00000512027 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
DDX41-213ENST00000512027 ZNF181Q2M3W8 571 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 ZNF404Q494X3 552 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 KLBQ86Z14 1044 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 OR11L1Q8NGX0 322 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 TMEM163Q8TC26 289 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 Q8TCH9 128 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 CENPNQ96H22 339 aaPredicted RBP13.8□□□□□ -0.2
DDX41-213ENST00000512027 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 SLC22A4Q9H015 551 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 RIBC2Q9H4K1 309 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 OCEL1Q9H607 264 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 C7orf69Q9H7B7 122 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 C1orf123Q9NWV4 160 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 RHBDD3Q9Y3P4 386 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 PPIAL4AQ9Y536 164 aa13.8□□□□□ -0.2
DDX41-213ENST00000512027 ANKRD30BLA7E2S9 258 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 C3orf80F5H4A9 247 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 WNT2P09544 360 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 IRF2P14316 349 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 ACKR3P25106 362 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 THBS2P35442 1172 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 ACTR3P61158 418 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 EFNB1P98172 346 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 ESCO2Q56NI9 601 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 AADACL4Q5VUY2 407 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 SFRP4Q6FHJ7 346 aaPredicted RBP13.79□□□□□ -0.2
DDX41-213ENST00000512027 RHOUQ7L0Q8 258 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 MEPCEQ7L2J0 689 aaKnown RBP13.79□□□□□ -0.2
DDX41-213ENST00000512027 C1orf87Q8N0U7 546 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 OR52H1Q8NGJ2 320 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 CNN2Q99439 309 aaKnown RBP13.79□□□□□ -0.2
DDX41-213ENST00000512027 PAPOLGQ9BWT3 736 aaKnown RBP13.79□□□□□ -0.2
DDX41-213ENST00000512027 PRRG3Q9BZD7 231 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 SP140LQ9H930 580 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 FN3KRPQ9HA64 309 aa13.79□□□□□ -0.2
DDX41-213ENST00000512027 A6NLC8 198 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 A8MXK9 166 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 APOL3O95236 402 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 PTBP3O95758 552 aaKnown RBP13.78□□□□□ -0.2
DDX41-213ENST00000512027 EGR1P18146 543 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 CSNK2BP67870 215 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 MFGE8Q08431 387 aaPredicted RBP13.78□□□□□ -0.2
DDX41-213ENST00000512027 PLEKHG7Q6ZR37 379 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 C1QL2Q7Z5L3 287 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 OR8S1Q8NH09 359 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 ERGIC1Q969X5 290 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 OSBPL10Q9BXB5 764 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 ADGRL4Q9HBW9 690 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 RNF7Q9UBF6 113 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
DDX41-213ENST00000512027 NOP16Q9Y3C1 178 aaKnown RBP13.78□□□□□ -0.2
DDX41-213ENST00000512027 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 hCG_1807616A0A1W2PRN6 198 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 J3QLI3 93 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 TCF21O43680 179 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 ZNF12P17014 697 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 EPHA1P21709 976 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 DDOSTP39656 456 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 CXCR4P61073 352 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 ELF3P78545 371 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 POU4F2Q12837 409 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 OR8B8Q15620 311 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 NXNL2Q5VZ03 156 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 SLC35F2Q8IXU6 374 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 C22orf15Q8WYQ4 148 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 NEIL1Q96FI4 390 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 OR8B4Q96RC9 309 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 TBX5Q99593 518 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 APOL4Q9BPW4 351 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 SSBP3Q9BWW4 388 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 GABARAPL3Q9BY60 117 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 FGF23Q9GZV9 251 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 H2AFY2Q9P0M6 372 aaPredicted RBP13.77□□□□□ -0.21
DDX41-213ENST00000512027 CTSZQ9UBR2 303 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 MIOXQ9UGB7 285 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 LRCH1Q9Y2L9 728 aa13.77□□□□□ -0.21
DDX41-213ENST00000512027 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 SLC22A31A6NKX4 558 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 EI24O14681 340 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 VENTXO95231 258 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 CFL1P23528 166 aaKnown RBP13.76□□□□□ -0.21
DDX41-213ENST00000512027 PITPNBP48739 271 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 GNB2P62879 340 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 ZNF154Q13106 437 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 PRDX4Q13162 271 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 KCTD18Q6PI47 426 aaPredicted RBP13.76□□□□□ -0.21
DDX41-213ENST00000512027 SSX6Q7RTT6 188 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms