RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SPIN4Q56A73 249 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SAMD13Q5VXD3 122 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIAA0895LQ68EN5 471 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM42Q69YG0 159 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD200R1LQ6Q8B3 271 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR2W3Q7Z3T1 314 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PTAR1Q7Z6K3 402 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 COMMD7Q86VX2 200 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 GJC3Q8NFK1 279 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR2M7Q8NG81 312 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR4M1Q8NGD0 313 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR6N1Q8NGY5 312 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR5P2Q8WZ92 322 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RORBQ92753 470 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HIST1H2ACQ93077 130 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 IMP4Q96G21 291 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR5M11Q96RB7 305 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ATP5SQ99766 215 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 NKX3-1Q99801 234 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 EBF4Q9BQW3 602 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAIM2Q9BWQ8 316 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PECRQ9BY49 303 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC17A9Q9BYT1 436 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PRRG4Q9BZD6 226 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC25A51Q9H1U9 297 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 KLRF1Q9NZS2 232 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ST6GALNAC2Q9UJ37 374 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 GNG8Q9UK08 70 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 BAIAP2Q9UQB8 552 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ANGPT4Q9Y264 503 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMED3Q9Y3Q3 217 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSPB11Q9Y547 144 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1A2Q9Y585 309 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 DOCK9Q9BZ29 2069 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 FRYQ5TBA9 3013 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 H3BS24 57 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 K7ESM1 405 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR31O00270 319 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TM4SF5O14894 197 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPRY2O43597 315 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PDE6DO43924 150 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SUPT7LO94864 414 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PDYNP01213 254 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ACSM4P0C7M7 580 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HOXB9P17482 250 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CELP19835 753 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPL10P27635 214 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 BDKRB1P46663 353 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 EFNA3P52797 238 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 MAZP56270 477 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDC42P60953 191 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CRADDP78560 199 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 INSM1Q01101 510 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ODF4Q2M2E3 257 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF284Q2VY69 593 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 EIPR1Q53HC9 387 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SIRPB2Q5JXA9 342 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 MED27Q6P2C8 311 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PIWIL4Q7Z3Z4 852 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSD11B1LQ7Z5J1 315 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ATG4DQ86TL0 474 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 IZUMO1Q8IYV9 350 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC26A10Q8NG04 563 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR4F6Q8NGB9 312 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1J2Q8NGS2 313 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 DEDD2Q8WXF8 326 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM37Q8WXS4 190 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM203Q969S6 136 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 MED8Q96G25 268 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ITCHQ96J02 903 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 KCTD7Q96MP8 289 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CNN2Q99439 309 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 TRIM51Q9BSJ1 452 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SHARPINQ9H0F6 387 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 NMNAT1Q9HAN9 279 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 AMBNQ9NP70 447 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 C1RLQ9NZP8 487 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RIMS3Q9UJD0 308 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SAMD4AQ9UPU9 718 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RBM7Q9Y580 266 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 PEX16Q9Y5Y5 336 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 LAMA5O15230 3695 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CNOT1A5YKK6 2376 aaKnown RBP4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A0A0MQY5 61 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR6C6A6NF89 314 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC1A7O00341 560 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB36O95755 333 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGLV3-19P01714 112 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARG1P05089 322 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 BPGMP07738 259 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 C1GALT1C1LP0DN25 315 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 BMP4P12644 408 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 GYPEP15421 78 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPL22P35268 128 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms