RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 GLYATL3Q5SZD4 288 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 MDP1Q86V88 176 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF584Q8IVC4 421 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 SLC30A7Q8NEW0 376 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 OR13C9Q8NGT0 318 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 CHPT1Q8WUD6 406 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 PIEZO1Q92508 2521 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 SDHCQ99643 169 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-209ENST00000511426 NOX3Q9HBY0 568 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 PIGLQ9Y2B2 252 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 LMX1BO60663 402 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 LYZL6O75951 148 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 BPNT1O95861 308 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 OCMP0CE72 109 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-209ENST00000511426 ARSBP15848 533 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 RAB6AP20340 208 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 PRKACBP22694 351 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF93P35789 620 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-209ENST00000511426 SCN1BQ07699 218 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF610Q8N9Z0 462 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 PNLDC1Q8NA58 520 aaKnown RBP13.19□□□□□ -0.3
SCLT1-209ENST00000511426 OR4M1Q8NGD0 313 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 SSC4DQ8WTU2 575 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 SLC25A28Q96A46 364 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 REPIN1Q9BWE0 567 aaKnown RBP13.19□□□□□ -0.3
SCLT1-209ENST00000511426 ABCB10Q9NRK6 738 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 RHBDL2Q9NX52 303 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 MED12LQ86YW9 2145 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 SPTBN2O15020 2390 aa13.19□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF816-ZNF321PA0A0X1KG74 233 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR5H1A6NKK0 313 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 PTTG1O95997 202 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 IL7P13232 177 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 POU3F4P49335 361 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 MMP15P51511 669 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 FAM3AP98173 230 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 STEAP3Q658P3 488 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 MRGPRGQ86SM5 289 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR5AS1Q8N127 324 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 Q8N402 240 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 SYNPRQ8TBG9 265 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 EIF3KQ9UBQ5 218 aaKnown RBP13.18□□□□□ -0.3
SCLT1-209ENST00000511426 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 DOCK7Q96N67 2140 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 GSK3AP49840 483 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 CASP6P55212 293 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 IFITM3Q01628 133 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 C2orf76Q3KRA6 126 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 BHLHA15Q7RTS1 189 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-209ENST00000511426 MRPL21Q7Z2W9 205 aaKnown RBP13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR2W3Q7Z3T1 314 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 CMTM4Q8IZR5 234 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 NAXEQ8NCW5 288 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 ST6GALNAC3Q8NDV1 305 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR51D1Q8NGF3 324 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR52N4Q8NGI2 321 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 PIGTQ969N2 578 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 OR10A4Q9H209 315 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 DIABLOQ9NR28 239 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 KCNN3Q9UGI6 736 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 RHBDD3Q9Y3P4 386 aa13.18□□□□□ -0.3
SCLT1-209ENST00000511426 C5orf63A6NC05 138 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 LDLRAD4O15165 306 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 HCKP08631 526 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 FAHP16930 419 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 ANOS1P23352 680 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 CLDN12P56749 244 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF92Q03936 586 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 TRIQKQ629K1 86 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 RAB12Q6IQ22 244 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 CXorf67Q86X51 503 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-209ENST00000511426 OR2AE1Q8NHA4 323 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 WBP1Q96G27 269 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 VKORC1Q9BQB6 163 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 NUDT16L1Q9BRJ7 211 aaKnown RBP13.17□□□□□ -0.3
SCLT1-209ENST00000511426 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-209ENST00000511426 CNTD2Q9H8S5 307 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
SCLT1-209ENST00000511426 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms