RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LRRC36Q1X8D7 754 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 GALNT4Q8N4A0 578 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
DDX41-212ENST00000511040 C19orf18Q8NEA5 215 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 PAPOLGQ9BWT3 736 aaKnown RBP11.76□□□□□ -0.53
DDX41-212ENST00000511040 PBOV1Q9GZY1 135 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 SLC22A4Q9H015 551 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
DDX41-212ENST00000511040 GTF2A1LQ9UNN4 478 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.536e-15■■■■□ 23.2
DDX41-212ENST00000511040 A0A1W2PQL4 384 aaPredicted RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 GMDSO60547 372 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 ZNF254O75437 659 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 RPP14O95059 124 aaKnown RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 PNPP00491 289 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 MSMBP08118 114 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 ANPEPP15144 967 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 ACKR3P25106 362 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 DDOSTP39656 456 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 SNRPGP62308 76 aaKnown RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 LPCAT4Q643R3 524 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 DEGS2Q6QHC5 323 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 GLCCI1Q86VQ1 547 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 LRRC28Q86X40 367 aaPredicted RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 COMMD2Q86X83 199 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 OR8S1Q8NH09 359 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 OR51F2Q8NH61 342 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 TRUB1Q8WWH5 349 aaKnown RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 RFKQ969G6 155 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 RNFT2Q96EX2 444 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 MNTQ99583 582 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 BEX2Q9BXY8 128 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 SHARPINQ9H0F6 387 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 RGCCQ9H4X1 137 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
DDX41-212ENST00000511040 NOP16Q9Y3C1 178 aaKnown RBP11.75□□□□□ -0.53
DDX41-212ENST00000511040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
DDX41-212ENST00000511040 A6NLC8 198 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 LOC110117498-PIK3R3F6TDL0 507 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 PHYHO14832 338 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 PLPP2O43688 288 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
DDX41-212ENST00000511040 OR2T7P0C7T2 308 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 IRF2P14316 349 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 GNALP38405 381 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 GATA4P43694 442 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
DDX41-212ENST00000511040 POU4F2Q12837 409 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 OR8B8Q15620 311 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 ZNF826PQ6ZT77 177 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 WDR86Q86TI4 376 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 CELF2-AS1Q8N7Q2 184 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 YIPF7Q8N8F6 280 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 OR11L1Q8NGX0 322 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 OR2T27Q8NH04 317 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 OR51E1Q8TCB6 317 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 FAM71F1Q96KD3 344 aaPredicted RBP11.74□□□□□ -0.53
DDX41-212ENST00000511040 FN3KRPQ9HA64 309 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 FAM118AQ9NWS6 357 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 HIF1ANQ9NWT6 349 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 R4GMQ9 66 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
DDX41-212ENST00000511040 LOC100130705A0A1B0GUX0 176 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 ACOD1A6NK06 481 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 ZNF850A8MQ14 1090 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 KRT8P05787 483 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 PEX2P28328 305 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 DCTDP32321 178 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 MDH2P40926 338 aaKnown RBP11.73□□□□□ -0.53
DDX41-212ENST00000511040 MTNR1AP48039 350 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 SEC61A1P61619 476 aaKnown RBP11.73□□□□□ -0.53
DDX41-212ENST00000511040 LCN2P80188 198 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 ZNF85Q03923 595 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 EGR3Q06889 387 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 PRDX4Q13162 271 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 TMED1Q13445 227 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 OCLNQ16625 522 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 BCL2L15Q5TBC7 163 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 ENTHD1Q8IYW4 607 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 KLHL36Q8N4N3 616 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 CSNK2A3Q8NEV1 391 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 Q8TCH9 128 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 PIGCQ92535 297 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 METTL17Q9H7H0 456 aaPredicted RBP11.73□□□□□ -0.53
DDX41-212ENST00000511040 GPR84Q9NQS5 396 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 C14orf119Q9NWQ9 140 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms