RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SPTSSAQ969W0 71 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 APOBEC3DQ96AK3 386 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 SGK3Q96BR1 496 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 HAVCR1Q96D42 359 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 RAB39BQ96DA2 213 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 FAHD2AQ96GK7 314 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 SIGLEC11Q96RL6 698 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 GAL3ST1Q99999 423 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ANKRD60Q9BZ19 345 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF665Q9H7R5 613 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 C8orf4Q9NR00 106 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ACOXLQ9NUZ1 547 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 HIF1ANQ9NWT6 349 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 DCAF16Q9NXF7 216 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LAMP5Q9UJQ1 280 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 SLC22A13Q9Y226 551 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 WIPI2Q9Y4P8 454 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 N6AMT1Q9Y5N5 214 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 SIRT4Q9Y6E7 314 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 A0A1B0GTI1 187 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 hCG_38984A0A1B0GV85 526 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 A0A1B0GWJ7 208 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 FAM157AC9JC47 383 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 J3QW42 95 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TTRP02766 147 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 MSMBP08118 114 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 HTR1AP08908 422 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 RAC2P15153 192 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 SELEP16581 610 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 KITLGP21583 273 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 MYF6P23409 242 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 PSMB10P40306 273 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 SLC6A9P48067 706 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 ETV1P50549 477 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 DVL1P1P54792 670 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TPTEP56180 551 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 OR12D2P58182 307 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 CDONQ4KMG0 1287 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 MEDAGQ5VYS4 303 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TTC23Q5W5X9 447 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2T2Q6IF00 324 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 FBXW12Q6X9E4 464 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 FAM57BQ71RH2 274 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 LHFPL3Q86UP9 236 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF679Q8IYX0 411 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF454Q8N9F8 522 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 BHLHE23Q8NDY6 225 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF555Q8NEP9 628 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 OR10H4Q8NGA5 316 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM158Q8WZ71 300 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 RORBQ92753 470 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 SPSB4Q96A44 273 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM186Q96B77 213 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TEX12Q9BXU0 123 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 FGF20Q9NP95 211 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 ATRQ13535 2644 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 DYSFO75923 2080 aa7.39□□□□□ -1.23
PDLIM5-213ENST00000509357 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 H3BSH0 61 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 SLC1A7O00341 560 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 PHF1O43189 567 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 FAM20BO75063 409 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 CD55P08174 381 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 ADH4P08319 380 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 H2BFMP0C1H6 154 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2T7P0C7T2 308 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 C21orf33P30042 268 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 VHLP40337 213 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 LMO4P61968 165 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 GRB2P62993 217 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 FAM3AP98173 230 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 TMED1Q13445 227 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 IL18R1Q13478 541 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 DMRTC1Q5HYR2 192 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 WDR38Q5JTN6 314 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 C6orf141Q5SZD1 244 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2G6Q5TZ20 316 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 LIPNQ5VXI9 398 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 DRAM2Q6UX65 266 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 RHOUQ7L0Q8 258 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 THAP5Q7Z6K1 395 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 WDR86Q86TI4 376 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 CATSPERDQ86XM0 798 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 C8orf59Q8N0T1 100 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF283Q8N7M2 679 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR8G5Q8NG78 346 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR13G1Q8NGZ3 307 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2T27Q8NH04 317 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR10AC1Q8NH08 325 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 SPRYD4Q8WW59 207 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 ITLN1Q8WWA0 313 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 PELI1Q96FA3 418 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 C1orf159Q96HA4 380 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2V2Q96R30 315 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms