RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 TIPARPQ7Z3E1 657 aaKnown RBP8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 NUFIP2Q7Z417 695 aaKnown RBP8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 MRPL41Q8IXM3 137 aaKnown RBP8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 GVQW1Q8N7I0 195 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 MFSD9Q8NBP5 474 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 APCDD1LQ8NCL9 501 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 OR8G5Q8NG78 346 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 ADAMTS15Q8TE58 950 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 OIT3Q8WWZ8 545 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 SOCS4Q8WXH5 440 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 ALG14Q96F25 216 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 ADAD1Q96M93 576 aaKnown RBP8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 PRRX2Q99811 253 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF2Q9BSG1 426 aaPredicted RBP8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 NUDT9Q9BW91 350 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 PRR13Q9NZ81 148 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 SRPK3Q9UPE1 567 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 OSGIN2Q9Y236 505 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 KLHDC2Q9Y2U9 406 aa8.94□□□□□ -0.98
PDGFRA-207ENST00000509092 CHD3Q12873 2000 aaKnown RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 A0A1B0GV50 99 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 GLOD5A6NK44 160 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 K7N7A8 449 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF264O43296 627 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 TBL1XO60907 577 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF217O75362 1048 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 STC2O76061 302 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 LCATP04180 440 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 APOBEC1P41238 236 aaKnown RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 DUSP8Q13202 625 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CCL14Q16627 93 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 LINC01590Q5TEZ4 76 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 COX18Q8N8Q8 333 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 PLPP7Q8NBV4 271 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 FAM213BQ8TBF2 198 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ERGIC1Q969X5 290 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 HIST1H2AAQ96QV6 131 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 NMNAT3Q96T66 252 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 AIF1LQ9BQI0 150 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ULBP3Q9BZM4 244 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 C5orf66Q9H5L9 145 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SRD5A3Q9H8P0 318 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 FKBP11Q9NYL4 201 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 GPR132Q9UNW8 380 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 BRCA2P51587 3418 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 TRBV11-1A0A0K0K1C0 115 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SLC38A8A6NNN8 435 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CEACAM18A8MTB9 384 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 H3BSH0 61 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SCGNO76038 276 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 GJB5O95377 273 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SCGB1D1O95968 90 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 HPRT1P00492 218 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 PPBPP02775 128 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 LAMP2P13473 410 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 OR10J1P30954 320 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CEACAM8P31997 349 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 RAB7AP51149 207 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CEBPGP53567 150 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 RND3P61587 244 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SUPT4H1P63272 117 aaKnown RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 HLA-DRB3P79483 266 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 SPOCK1Q08629 439 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 DMWDQ09019 674 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 FOXF1Q12946 379 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 PMS2P11Q13670 270 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 C1orf189Q5VU69 101 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 PTX4Q96A99 478 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF689Q96CS4 500 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 KTI12Q96EK9 354 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CNRIP1Q96F85 164 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ALKBH3Q96Q83 286 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 KXD1Q9BQD3 176 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 MIEN1Q9BRT3 115 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 ALG12Q9BV10 488 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 PELI2Q9HAT8 420 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 FOXJ2Q9P0K8 574 aa8.93□□□□□ -0.98
PDGFRA-207ENST00000509092 CENPVL1A0A0U1RR11 272 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF860A6NHJ4 632 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 A6NIZ1 184 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 OPN1MWP04001 364 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 UMODP07911 640 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 OPN1MW2P0DN77 364 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 OPN1MW3P0DN78 364 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 CCKBRP32239 447 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 TNFSF10P50591 281 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 LBX1P52954 281 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 SLC22A6Q4U2R8 563 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 GLYATL3Q5SZD4 288 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 SLC25A24Q6NUK1 477 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF550Q7Z398 422 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 ZNF100Q8IYN0 542 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 GCNT2Q8N0V5 402 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 TMEM156Q8N614 296 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 CYB561D1Q8N8Q1 229 aa8.92□□□□□ -0.98
PDGFRA-207ENST00000509092 DTWD2Q8NBA8 298 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms