RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CDC42P60953 191 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 OR8B8Q15620 311 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 ZNF829Q3KNS6 432 aaPredicted RBP16.71■□□□□ 0.27
SFXN1-209ENST00000508290 ESCO2Q56NI9 601 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 DCAF12L2Q5VW00 463 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 LRRN1Q6UXK5 716 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 NLRC3Q7RTR2 1065 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 OR8S1Q8NH09 359 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 ZNF420Q8TAQ5 688 aaPredicted RBP16.71■□□□□ 0.27
SFXN1-209ENST00000508290 USE1Q9NZ43 259 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 PPIAL4AQ9Y536 164 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 MPC1Q9Y5U8 109 aa16.71■□□□□ 0.27
SFXN1-209ENST00000508290 ANK3Q12955 4377 aaKnown RBP16.7■□□□□ 0.26
SFXN1-209ENST00000508290 A0A0U1RQV5 110 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 SAC3D1A6NKF1 404 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 F5H0A9 414 aaPredicted RBP16.7■□□□□ 0.26
SFXN1-209ENST00000508290 ALPLP05186 524 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 EPHA2P29317 976 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 GSK3AP49840 483 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 IL5RAQ01344 420 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 ZNF404Q494X3 552 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 FAHD2BQ6P2I3 314 aaPredicted RBP16.7■□□□□ 0.26
SFXN1-209ENST00000508290 RFLNBQ8N5W9 214 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 FAHD2AQ96GK7 314 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 OR8B4Q96RC9 309 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 RIBC2Q9H4K1 309 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 MOB1AQ9H8S9 216 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 CLN6Q9NWW5 311 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 RNF7Q9UBF6 113 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 KLHDC2Q9Y2U9 406 aa16.7■□□□□ 0.26
SFXN1-209ENST00000508290 C5orf63A6NC05 138 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 ANXA2P2A6NMY6 339 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 CEACAM18A8MTB9 384 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 H3BNX3 289 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 CYB5R3P00387 301 aaPredicted RBP16.69■□□□□ 0.26
SFXN1-209ENST00000508290 HTR1FP30939 366 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 RIDAP52758 137 aaKnown RBP16.69■□□□□ 0.26
SFXN1-209ENST00000508290 EGR3Q06889 387 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 DCDC5Q6ZRR9 648 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 IL17RELQ6ZVW7 336 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 TMEM158Q8WZ71 300 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 IL4I1Q96RQ9 567 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 PKP2Q99959 881 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 ADGRL4Q9HBW9 690 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 TMEM165Q9HC07 324 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 BRD7Q9NPI1 651 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 METRNQ9UJH8 293 aa16.69■□□□□ 0.26
SFXN1-209ENST00000508290 ATRQ13535 2644 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 TMEM269A0A1B0GVZ9 245 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 ZNF670-ZNF695F2Z2N8 137 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 NDUFA2O43678 99 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 FAM20BO75063 409 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 CST4P01036 141 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 MRPL3P09001 348 aaKnown RBP16.68■□□□□ 0.26
SFXN1-209ENST00000508290 WNT2P09544 360 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 RPS2P15880 293 aaKnown RBP16.68■□□□□ 0.26
SFXN1-209ENST00000508290 ANOS1P23352 680 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 ALDH3A2P51648 485 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 GFOD2Q3B7J2 385 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 ZNF322Q6U7Q0 402 aaPredicted RBP16.68■□□□□ 0.26
SFXN1-209ENST00000508290 SLC35F2Q8IXU6 374 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 NEIL1Q96FI4 390 aaPredicted RBP16.68■□□□□ 0.26
SFXN1-209ENST00000508290 MICU1Q9BPX6 476 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 PAPOLGQ9BWT3 736 aaKnown RBP16.68■□□□□ 0.26
SFXN1-209ENST00000508290 RNPEPL1Q9HAU8 725 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 IMPAD1Q9NX62 359 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 OR5V1Q9UGF6 321 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 DYSFO75923 2080 aa16.68■□□□□ 0.26
SFXN1-209ENST00000508290 PMELP40967 661 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 MAP2K3P46734 347 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 LCN2P80188 198 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 ZBTB37Q5TC79 503 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 PRAMEF6Q5VXH4 476 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 LIPNQ5VXI9 398 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 KRT74Q7RTS7 529 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 OR8B12Q8NGG6 310 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 OR8B3Q8NGG8 313 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 HRASLS5Q96KN8 279 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 OR8B2Q96RD0 313 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 C9orf16Q9BUW7 83 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 RTL8AQ9BWD3 113 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 UFSP2Q9NUQ7 469 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 FAM206AQ9NX38 181 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 ZNF319Q9P2F9 582 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 NUFIP1Q9UHK0 495 aaKnown RBP16.67■□□□□ 0.26
SFXN1-209ENST00000508290 IKZF2Q9UKS7 526 aa16.67■□□□□ 0.26
SFXN1-209ENST00000508290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.67■□□□□ 0.26
SFXN1-209ENST00000508290 A0A0A6YYJ9 748 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 TRAV38-1A0A0B4J264 116 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 A6NLC8 198 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 TMEM210A6NLX4 147 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 SNTNA6NMZ2 147 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 EI24O14681 340 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 OR2T7P0C7T2 308 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 NPY4RP50391 375 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 CXCR4P61073 352 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 MPPED2Q15777 294 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 SLC25A30Q5SVS4 291 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms