RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 LIPNQ5VXI9 398 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ACBD7Q8N6N7 88 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 SETD9Q8NE22 299 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 TFAP2CQ92754 450 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 MEGF10Q96KG7 1140 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ACOXLQ9NUZ1 547 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 MRPS18AQ9NVS2 196 aaKnown RBP15.38■□□□□ 0.05
NPHP4-210ENST00000506941 DCAF16Q9NXF7 216 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 MRPL15Q9P015 296 aaKnown RBP15.38■□□□□ 0.05
NPHP4-210ENST00000506941 RPL36Q9Y3U8 105 aaKnown RBP15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ANK3Q12955 4377 aaKnown RBP15.37■□□□□ 0.05
NPHP4-210ENST00000506941 IGHV3-64DA0A0J9YX35 117 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 DAPL1A0PJW8 107 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 IGHA1P01876 353 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 LOXL1Q08397 574 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-210ENST00000506941 RAB40BQ12829 278 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 CDONQ4KMG0 1287 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 C6orf52Q5T4I8 152 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 LAIR2Q6ISS4 152 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 C8orf59Q8N0T1 100 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-210ENST00000506941 OR52I1Q8NGK6 324 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 OR51E1Q8TCB6 317 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 RORBQ92753 470 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 ZNF649Q9BS31 505 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 ADAT1Q9BUB4 502 aaKnown RBP15.37■□□□□ 0.05
NPHP4-210ENST00000506941 PPP1R3EQ9H7J1 279 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 GNG8Q9UK08 70 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 OR52A1Q9UKL2 312 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 GTF2A1LQ9UNN4 478 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 PCDHGB1Q9Y5G3 927 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 HSPE1-MOB4S4R3N1 261 aa15.37■□□□□ 0.05
NPHP4-210ENST00000506941 H0YJX3 145 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 WNT9BO14905 357 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
NPHP4-210ENST00000506941 FAM20BO75063 409 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 TNFRSF1AP19438 455 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 USF1P22415 310 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-210ENST00000506941 DDOSTP39656 456 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 PSMB10P40306 273 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 TMEM33P57088 247 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 OR12D2P58182 307 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 MAB21L1Q13394 359 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 OR8G1Q15617 311 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 HFEQ30201 348 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 BCL2L15Q5TBC7 163 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 BIVMQ86UB2 503 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 LHFPL3Q86UP9 236 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 CATSPERDQ86XM0 798 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 ELMOD2Q8IZ81 293 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 ZNF540Q8NDQ6 660 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 FBLIM1Q8WUP2 373 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 CCL17Q92583 94 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 MOB1AQ9H8S9 216 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 GCM1Q9NP62 436 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 GPR84Q9NQS5 396 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 ZNF391Q9UJN7 358 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 SLC22A13Q9Y226 551 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 RHBDD3Q9Y3P4 386 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 SNX5Q9Y5X3 404 aa15.36■□□□□ 0.05
NPHP4-210ENST00000506941 NIPBLQ6KC79 2804 aaeCLIP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 GMDSO60547 372 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 FADS2O95864 444 aaKnown RBP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 LY6G6DO95868 133 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 TACSTD2P09758 323 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 CD200P41217 278 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 GPR6P46095 362 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 SRP9P49458 86 aaKnown RBP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 AVPI1Q5T686 147 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 FAM220AQ7Z4H9 259 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 PRSS35Q8N3Z0 413 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 SLC22A4Q9H015 551 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 FGF20Q9NP95 211 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 ERVK13-1Q9NX77 482 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 PPP1R3CQ9UQK1 317 aa15.35■□□□□ 0.05
NPHP4-210ENST00000506941 RRP15Q9Y3B9 282 aaKnown RBP15.35■□□□□ 0.05
NPHP4-210ENST00000506941 DOCK11Q5JSL3 2073 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 LOC100289279A0A1B0GTE1 492 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 A0A1B0GTI1 187 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 LRP5LA4QPB2 252 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 ANKRD30BLA7E2S9 258 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 CLDN25C9JDP6 229 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 IL2RGP31785 369 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 KIR3DL2P43630 455 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 GALEQ14376 348 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 TMEM249Q2WGJ8 235 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 KLHL22Q53GT1 634 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 WDR38Q5JTN6 314 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 MOGAT3Q86VF5 341 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 COMMD2Q86X83 199 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 CSNK2A3Q8NEV1 391 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 ZNF420Q8TAQ5 688 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-210ENST00000506941 FAM71F1Q96KD3 344 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-210ENST00000506941 ALG8Q9BVK2 526 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 NARFLQ9H6Q4 476 aa15.34■□□□□ 0.05
NPHP4-210ENST00000506941 P2RY10O00398 339 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 LIMS3P0CW19 117 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 LIMS4P0CW20 117 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 PMELP40967 661 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 GATA4P43694 442 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms