RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DNAJC9Q8WXX5 260 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 UTP4Q969X6 686 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SGK3Q96BR1 496 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 ZMYND19Q96E35 227 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 NRBF2Q96F24 287 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 OR51V1Q9H2C8 321 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 SP140LQ9H930 580 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 FN3KRPQ9HA64 309 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF556Q9HAH1 456 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 ESM1Q9NQ30 184 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 RNF7Q9UBF6 113 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 OR5V1Q9UGF6 321 aa7.57□□□□□ -1.2
PDLIM5-209ENST00000506632 hCG_2014768A0A024R1R8 64 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 KIR2DS1A0A191URI9 304 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 LGALS8O00214 317 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 PHYHO14832 338 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 TBX1O43435 398 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 SELENOFO60613 162 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 LHBP01229 141 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 ANXA2P07355 339 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 LYNP07948 512 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 IRF2P14316 349 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 HSD11B1P28845 292 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 PITPNBP48739 271 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 COMPP49747 757 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 GSK3AP49840 483 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 DAPP51397 102 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 GNB2P62879 340 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8B8Q15620 311 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 ARMCX4Q5H9R4 360 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 TMEM236Q5W0B7 351 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 WDR25Q64LD2 544 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 LRRN1Q6UXK5 716 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM57BQ71RH2 274 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 WDR86Q86TI4 376 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 C11orf53Q8IXP5 236 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 GCSAMQ8N6F7 178 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 C19orf18Q8NEA5 215 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 BBS1Q8NFJ9 593 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8B3Q8NGG8 313 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 RAB40AQ8WXH6 277 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 UPRTQ96BW1 309 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 REEP6Q96HR9 211 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8B2Q96RD0 313 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 JMJD8Q96S16 334 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 MRI1Q9BV20 369 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 DNAJC27Q9NZQ0 273 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 CTSZQ9UBR2 303 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF69Q9UC07 566 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 NUP50Q9UKX7 468 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 KLHDC2Q9Y2U9 406 aa7.56□□□□□ -1.2
PDLIM5-209ENST00000506632 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TMEM89A2RUT3 159 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 CCDC182A6NF36 153 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 ANKRD30BLA7E2S9 258 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 C22orf46C9J442 243 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TRIM77I1YAP6 450 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 FCN3O75636 299 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TIPRLO75663 272 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 PLATP00750 562 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 H2BFMP0C1H6 154 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 ALOX5APP20292 161 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 FPR2P25090 351 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 CFHR2P36980 270 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 NAA10P41227 235 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 CRISP1P54107 249 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 MZT1Q08AG7 82 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TIGD6Q17RP2 521 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TEX36Q5VZQ5 186 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF826PQ6ZT77 177 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 C9orf139Q6ZV77 190 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 DOK3Q7L591 496 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 KRT74Q7RTS7 529 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM90A1Q86YD7 464 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 CSNK2A3Q8NEV1 391 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 OR5K1Q8NHB7 308 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 C22orf15Q8WYQ4 148 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 NUDT16L1Q9BRJ7 211 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 YIPF3Q9GZM5 350 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TLNRD1Q9H1K6 362 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 OR10A2Q9H208 303 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 RGCCQ9H4X1 137 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 NIPAL2Q9H841 368 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TRIM36Q9NQ86 728 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 PAPOLBQ9NRJ5 636 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 C14orf119Q9NWQ9 140 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 C1orf123Q9NWV4 160 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 CLN8Q9UBY8 286 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 N6AMT1Q9Y5N5 214 aa7.55□□□□□ -1.2
PDLIM5-209ENST00000506632 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 OOEPA6NGQ2 149 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 PRR32B1ATL7 298 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms