RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MYDGFQ969H8 173 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 RASD2Q96D21 266 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 ZNF582Q96NG8 517 aaPredicted RBP5.6□□□□□ -1.51
VCAN-206ENST00000505615 OR52E6Q96RD3 313 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 PRR25Q96S07 402 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 KCNJ15Q99712 375 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 ZNF426Q9BUY5 554 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 ALG12Q9BV10 488 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 NUF2Q9BZD4 464 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 SEPSECSQ9HD40 501 aaKnown RBP5.6□□□□□ -1.51
VCAN-206ENST00000505615 POLE4Q9NR33 117 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 TMEM100Q9NV29 134 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
VCAN-206ENST00000505615 BLOC1S6Q9UL45 172 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 TMEM5Q9Y2B1 443 aa5.6□□□□□ -1.51
VCAN-206ENST00000505615 RRP15Q9Y3B9 282 aaKnown RBP5.6□□□□□ -1.51
VCAN-206ENST00000505615 TSSC4Q9Y5U2 329 aaPredicted RBP5.6□□□□□ -1.51
VCAN-206ENST00000505615 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 IGHV3OR15-7A0A075B7D8 119 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 GMNCA6NCL1 334 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 A6NDX4 124 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 NPIPB13A6NJU9 1138 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 C12orf71A8MTZ7 269 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 NPIPB4C9JG80 1138 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 BLOC1S5-TXNDC5H3BN57 136 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 KPNA4O00629 521 aaPredicted RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 FMO6PO60774 539 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 IFNW1P05000 195 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 SERPINE1P05121 402 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 LPLP06858 475 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 ZCCHC18P0CG32 403 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 SELLP14151 372 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 AMY2BP19961 511 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 AQP2P41181 271 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 VDAC2P45880 294 aaPredicted RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 CCR9P51686 369 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 RGNQ15493 299 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 BEND6Q5SZJ8 279 aaPredicted RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 TEX36Q5VZQ5 186 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 NCR3LG1Q68D85 454 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 LIN54Q6MZP7 749 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 ZNF613Q6PF04 617 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 TMEM219Q86XT9 240 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 FAM216BQ8N7L0 139 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 MOSPD2Q8NHP6 518 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 AENQ8WTP8 325 aaKnown RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 IFT81Q8WYA0 676 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 ZNF583Q96ND8 569 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 MCHR1Q99705 422 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 CPPED1Q9BRF8 314 aaPredicted RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 PRSS22Q9GZN4 317 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 WDR76Q9H967 626 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 MEPEQ9NQ76 525 aaPredicted RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 TRIM36Q9NQ86 728 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 AIG1Q9NVV5 245 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 STX18Q9P2W9 335 aaKnown RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 PRPF19Q9UMS4 504 aaKnown RBP5.59□□□□□ -1.51
VCAN-206ENST00000505615 TCF19Q9Y242 345 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 MYRFQ9Y2G1 1151 aa5.59□□□□□ -1.51
VCAN-206ENST00000505615 TCRBV4S1A1TA0A5B7 111 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 TMEM247A6NEH6 219 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 VGLL3A8MV65 326 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 H3BUI4 141 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.58□□□□□ -1.52
VCAN-206ENST00000505615 M0R1W7 72 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 SLC22A3O75751 556 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 TNFRSF6BO95407 300 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 CLIC3O95833 236 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 IGF2P01344 180 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 HIST1H2ABP04908 130 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 UMPSP11172 480 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 HOXB9P17482 250 aaPredicted RBP5.58□□□□□ -1.52
VCAN-206ENST00000505615 KRT4P19013 534 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 BLCAPP62952 87 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 LRRC74AQ0VAA2 488 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 SCRN3Q0VDG4 424 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 WDR38Q5JTN6 314 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 C10orf99Q6UWK7 81 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 COLCA1Q6ZS62 124 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 ZNF826PQ6ZT77 177 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 TRMT10CQ7L0Y3 403 aaKnown RBP5.58□□□□□ -1.52
VCAN-206ENST00000505615 HIST3H2AQ7L7L0 130 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 SBSPONQ8IVN8 264 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 DYNAPQ8N1N2 210 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 NFKBIDQ8NI38 313 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 LRRC8CQ8TDW0 803 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 TSPEARQ8WU66 669 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 HIST1H2ACQ93077 130 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 APOBEC3DQ96AK3 386 aaPredicted RBP5.58□□□□□ -1.52
VCAN-206ENST00000505615 CCL13Q99616 98 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 PRSS27Q9BQR3 290 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 WACQ9BTA9 647 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 TXNIPQ9H3M7 391 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 METTL8Q9H825 291 aaKnown RBP5.58□□□□□ -1.52
VCAN-206ENST00000505615 ATPIF1Q9UII2 106 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 ANGPT4Q9Y264 503 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 CAPN7Q9Y6W3 813 aa5.58□□□□□ -1.52
VCAN-206ENST00000505615 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms