RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 PPIAL4FP0DN26 164 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 GSK3AP49840 483 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 ROM1Q03395 351 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 HNRNPA0Q13151 305 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 ZNF771Q7L3S4 317 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 IL4I1Q96RQ9 567 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 RIBC2Q9H4K1 309 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 PPIAL4AQ9Y536 164 aa17.79■□□□□ 0.44
TRAPPC11-203ENST00000504526 CEACAM18A8MTB9 384 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 F5H0A9 414 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 FAM20BO75063 409 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 PMELP40967 661 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 HCCSP53701 268 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 SCGB2A2Q13296 93 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 GFOD2Q3B7J2 385 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 DCAF12L2Q5VW00 463 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 PRAMEF6Q5VXH4 476 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 ZNF679Q8IYX0 411 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 OR8J1Q8NGP2 316 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 OR8S1Q8NH09 359 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 OR8B4Q96RC9 309 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 TMEM165Q9HC07 324 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 ABCB9Q9NP78 766 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 ZNF319Q9P2F9 582 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 MIOXQ9UGB7 285 aa17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 POLR3KQ9Y2Y1 108 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-203ENST00000504526 A8MXK9 166 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 M0R129 80 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 POLR2IP36954 125 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 GNALP38405 381 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 CDC42P60953 191 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 LCN2P80188 198 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 POU4F2Q12837 409 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 OR8B8Q15620 311 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 MPPED2Q15777 294 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 ESCO2Q56NI9 601 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 BCDIN3DQ7Z5W3 292 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 UFSP2Q9NUQ7 469 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 USE1Q9NZ43 259 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 RNF7Q9UBF6 113 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 WARS2Q9UGM6 360 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 LRCH1Q9Y2L9 728 aa17.77■□□□□ 0.44
TRAPPC11-203ENST00000504526 TMEM269A0A1B0GVZ9 245 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 ALPLP05186 524 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 WNT2P09544 360 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 RBMXP38159 391 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 RIDAP52758 137 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZNF829Q3KNS6 432 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZNF404Q494X3 552 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 SLC35F2Q8IXU6 374 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 OR8B12Q8NGG6 310 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 TRUB1Q8WWH5 349 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 ADGRL4Q9HBW9 690 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 CLN6Q9NWW5 311 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 METRNQ9UJH8 293 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 IKZF2Q9UKS7 526 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 COPS3Q9UNS2 423 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 MPC1Q9Y5U8 109 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 ATRQ13535 2644 aa17.76■□□□□ 0.43
TRAPPC11-203ENST00000504526 A0A0U1RQV5 110 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 ANXA2P2A6NMY6 339 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZNF670-ZNF695F2Z2N8 137 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 EI24O14681 340 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 RPS2P15880 293 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 HTR1FP30939 366 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 ALDH3A2P51648 485 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 IL5RAQ01344 420 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 TMED1Q13445 227 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 KCNJ8Q15842 424 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 NLRC3Q7RTR2 1065 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 DVL3Q92997 716 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 RFKQ969G6 155 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 TMEM246Q9BRR3 403 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 PAPOLGQ9BWT3 736 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 TMPRSS13Q9BYE2 586 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 TRIM36Q9NQ86 728 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 FAM206AQ9NX38 181 aa17.75■□□□□ 0.43
TRAPPC11-203ENST00000504526 A6NLC8 198 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 PSMD9O00233 223 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 PHF1O43189 567 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZNF205O95201 554 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 GRPP07492 148 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 ATP6V1B1P15313 513 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZFP36P26651 326 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 CXCR4P61073 352 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 ZNF322Q6U7Q0 402 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 DCDC5Q6ZRR9 648 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 RFLNBQ8N5W9 214 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 NEIL1Q96FI4 390 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 MICU1Q9BPX6 476 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 S100A14Q9HCY8 104 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 C1orf123Q9NWV4 160 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 IMPAD1Q9NX62 359 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 RHBDD3Q9Y3P4 386 aa17.74■□□□□ 0.43
TRAPPC11-203ENST00000504526 CST4P01036 141 aa17.73■□□□□ 0.43
TRAPPC11-203ENST00000504526 EGR3Q06889 387 aa17.73■□□□□ 0.43
TRAPPC11-203ENST00000504526 FAM201AQ5SY85 155 aa17.73■□□□□ 0.43
TRAPPC11-203ENST00000504526 GALNT4Q8N4A0 578 aa17.73■□□□□ 0.43
TRAPPC11-203ENST00000504526 OR8B3Q8NGG8 313 aa17.73■□□□□ 0.43
TRAPPC11-203ENST00000504526 OR51G2Q8NGK0 314 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms