RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TMEM182Q6ZP80 229 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 BCORP1Q8N888 145 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 CSNK2A3Q8NEV1 391 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 SLC26A10Q8NG04 563 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ZDHHC12Q96GR4 267 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 SSX3Q99909 188 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 MRI1Q9BV20 369 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 TEX101Q9BY14 249 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 NELFAQ9H3P2 528 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 FAM60AQ9NP50 221 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 MMP25Q9NPA2 562 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 UFSP2Q9NUQ7 469 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 EHFQ9NZC4 300 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 DOK5Q9P104 306 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 WIF1Q9Y5W5 379 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ASXL3Q9C0F0 2248 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 GPR89AB7ZAQ6 455 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ARPC3O15145 178 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 CRTAPO75718 401 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 GPR89BP0CG08 455 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 NR2C1P13056 603 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 MGAT2Q10469 447 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 C16orf47Q6ZP98 133 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 MR1Q95460 341 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ANKRD9Q96BM1 317 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 OR8B4Q96RC9 309 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF426Q9BUY5 554 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 EDEM2Q9BV94 578 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 MED29Q9NX70 200 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 GDE1Q9NZC3 331 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 TGIF2-C20orf24A0A0A6YYL0 155 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF726A6NNF4 738 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 CYR61O00622 381 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 CYB5BO43169 146 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 HCKP08631 526 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 FCGR3AP08637 254 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 HNRNPA1P09651 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 VSIG8P0DPA2 414 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 DVL1P1P54792 670 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 CHAF1BQ13112 559 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 PDCD1Q15116 288 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 SSX2Q16385 188 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF260Q3ZCT1 412 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 LPCAT3Q6P1A2 487 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 IL34Q6ZMJ4 242 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 OR9K2Q8NGE7 335 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ADAMTS17Q8TE56 1095 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 RSC1A1Q92681 617 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 TMEM230Q96A57 120 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ADAT3Q96EY9 351 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF764Q96H86 408 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 LRFN5Q96NI6 719 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 WFIKKN1Q96NZ8 548 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 OCSTAMPQ9BR26 566 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 MFRPQ9BY79 579 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 SEBOXQ9HB31 216 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 TMEM100Q9NV29 134 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 PILRAQ9UKJ1 303 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 HHLA2Q9UM44 414 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 POLR1DQ9Y2S0 133 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 SHANK1Q9Y566 2161 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 A0A087X0M5 115 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 A0A1B0GX30 115 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF729A6NN14 1252 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 H0YL77 283 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 LINC01565O15544 149 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF217O75362 1048 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 TRGC2P03986 189 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF823P16415 610 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 AGAP20933 346 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 NHLH2Q02577 135 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF124Q15973 351 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 Q3ZCU0 254 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 CARD17Q5XLA6 110 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 PLXDC2Q6UX71 529 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 Q6ZSR6 202 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ARRDC1Q8N5I2 433 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 TERB2Q8NHR7 220 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ADAMTS18Q8TE60 1221 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 MISP3Q96FF7 219 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 ARHGAP5-AS1Q96IT6 56 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 DGAT2Q96PD7 388 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 HDHD3Q9BSH5 251 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 METTL1Q9UBP6 276 aaKnown RBP6.78□□□□□ -1.32
NEDD9-208ENST00000504387 OR52A1Q9UKL2 312 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 HSF4Q9ULV5 492 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 WASF3Q9UPY6 502 aa6.78□□□□□ -1.32
NEDD9-208ENST00000504387 NOSIPQ9Y314 301 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms