RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 FBP1P09467 338 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 HIST1H1DP16402 221 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PRKACAP17612 351 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 COX5AP20674 150 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 GABRR1P24046 479 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 IKZF1Q13422 519 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ENDOGQ14249 297 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 EBPQ15125 230 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CYB5R2Q6BCY4 276 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 LAIR1Q6GTX8 287 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM211Q6ICI0 200 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 OR10K2Q6IF99 312 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PRSS54Q6PEW0 395 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TEX261Q6UWH6 196 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SAXO1Q8IYX7 474 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FAM58AQ8N1B3 248 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF610Q8N9Z0 462 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 NFAM1Q8NET5 270 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 OR5D13Q8NGL4 314 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 OR4A16Q8NH70 328 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 IFI44Q8TCB0 444 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 HAS2Q92819 552 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RPUSD4Q96CM3 377 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 MYEOVQ96EZ4 313 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 AP1S3Q96PC3 154 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 S1PR3Q99500 378 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SLC6A17Q9H1V8 727 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 POFUT1Q9H488 388 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 IL20RAQ9UHF4 553 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FBXO4Q9UKT5 387 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FLVCR1Q9Y5Y0 555 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 U3KQ87 197 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM218A2RU14 115 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SMIM30A4D0T7 59 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM210A6NLX4 147 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 MEN1O00255 615 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PLPP3O14495 311 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ICOSLGO75144 302 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 NXPH2O95156 264 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 HPNP05981 417 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SULT1A3P0DMM9 295 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SULT1A4P0DMN0 295 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SMIM10L1P0DMW3 83 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RAB4AP20338 218 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FUT4P22083 530 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 EPHA8P29322 1005 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SNCAP37840 140 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CD96P40200 585 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 HOXC5Q00444 222 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 GABRA6Q16445 453 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TIGITQ495A1 244 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF542PQ5EBM4 170 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 VAX1Q5SQQ9 334 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ETFRF1Q6IPR1 90 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF770Q6IQ21 691 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PRR22Q8IZ63 422 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 LINC01555Q8NAE3 123 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 KDF1Q8NAX2 398 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 EID2BQ96D98 161 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SMIM10Q96HG1 83 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM204Q9BSN7 226 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PRR14Q9BWN1 585 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 MED20Q9H944 212 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 GALNT9Q9HCQ5 603 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RPS10P5Q9NQ39 176 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TAS2R4Q9NYW5 299 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PCDHGA9Q9Y5G4 932 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 LOC100509620A0A075B734 347 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 A0A0A6YYJ9 748 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 MDFIC2A0A1B0GVS7 189 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FITM1A5D6W6 292 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CYR61O00622 381 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 FADS1O60427 444 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PTP4A3O75365 173 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 EPPINO95925 133 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CBX7O95931 251 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 GAPDHP04406 335 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 EIF4EP06730 217 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 H2AFB1P0C5Y9 115 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 CLEC2LP0C7M8 214 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SPP1P10451 314 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RPL12P30050 165 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 KIR2DL1P43626 348 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PPP1CAP62136 330 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 MRPS34P82930 218 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 IL24Q13007 206 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 PLGLAQ15195 96 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SSX2Q16385 188 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RIPPLY2Q5TAB7 128 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ATPAF1Q5TC12 328 aaPredicted RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 RBM45Q8IUH3 476 aaKnown RBP4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM130Q8N3G9 435 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 DTX3Q8N9I9 347 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 SCMH1Q96GD3 660 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 TTTY10Q9BZA0 68 aa4.26□□□□□ -1.73
NDFIP1-202ENST00000503388 R3HDMLQ9H3Y0 253 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms