RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IGHV1-69-2A0A0G2JMI3 117 aa21.28■■□□□ 1
LSM6-202ENST00000502781 H7C1Q1 480 aa21.28■■□□□ 1
LSM6-202ENST00000502781 RPP14O95059 124 aaKnown RBP21.28■■□□□ 1
LSM6-202ENST00000502781 CD99P14209 185 aa21.28■■□□□ 1
LSM6-202ENST00000502781 ACKR3P25106 362 aa21.28■■□□□ 1
LSM6-202ENST00000502781 DCKP27707 260 aa21.28■■□□□ 1
LSM6-202ENST00000502781 VHLP40337 213 aa21.28■■□□□ 1
LSM6-202ENST00000502781 HSPA13P48723 471 aa21.28■■□□□ 1
LSM6-202ENST00000502781 OR12D2P58182 307 aa21.28■■□□□ 1
LSM6-202ENST00000502781 ACTA2P62736 377 aa21.28■■□□□ 1
LSM6-202ENST00000502781 ACTG2P63267 376 aa21.28■■□□□ 1
LSM6-202ENST00000502781 KRT74Q7RTS7 529 aa21.28■■□□□ 1
LSM6-202ENST00000502781 FAM220AQ7Z4H9 259 aa21.28■■□□□ 1
LSM6-202ENST00000502781 SYS1Q8N2H4 156 aa21.28■■□□□ 1
LSM6-202ENST00000502781 REG4Q9BYZ8 158 aa21.28■■□□□ 1
LSM6-202ENST00000502781 IRGMA1A4Y4 181 aa21.27■■□□□ 1
LSM6-202ENST00000502781 HLA-DPB1P04440 258 aa21.27■■□□□ 1
LSM6-202ENST00000502781 TACSTD2P09758 323 aa21.27■■□□□ 1
LSM6-202ENST00000502781 LIMS3P0CW19 117 aa21.27■■□□□ 1
LSM6-202ENST00000502781 LIMS4P0CW20 117 aa21.27■■□□□ 1
LSM6-202ENST00000502781 PIPP12273 146 aaPredicted RBP21.27■■□□□ 1
LSM6-202ENST00000502781 CA6P23280 308 aa21.27■■□□□ 1
LSM6-202ENST00000502781 BCL2L15Q5TBC7 163 aa21.27■■□□□ 1
LSM6-202ENST00000502781 FDX2Q6P4F2 183 aa21.27■■□□□ 1
LSM6-202ENST00000502781 Q6ZSR3 168 aa21.27■■□□□ 1
LSM6-202ENST00000502781 KLBQ86Z14 1044 aa21.27■■□□□ 1
LSM6-202ENST00000502781 PLPP7Q8NBV4 271 aa21.27■■□□□ 1
LSM6-202ENST00000502781 CSNK2A3Q8NEV1 391 aa21.27■■□□□ 1
LSM6-202ENST00000502781 OR51E1Q8TCB6 317 aa21.27■■□□□ 1
LSM6-202ENST00000502781 GGHQ92820 318 aa21.27■■□□□ 1
LSM6-202ENST00000502781 MRPL48Q96GC5 212 aaKnown RBP21.27■■□□□ 1
LSM6-202ENST00000502781 OR2V2Q96R30 315 aa21.27■■□□□ 1
LSM6-202ENST00000502781 MYCBPQ99417 103 aaPredicted RBP21.27■■□□□ 1
LSM6-202ENST00000502781 PIMREGQ9BSJ6 248 aa21.27■■□□□ 1
LSM6-202ENST00000502781 ALG8Q9BVK2 526 aa21.27■■□□□ 1
LSM6-202ENST00000502781 DIMT1Q9UNQ2 313 aaKnown RBP21.27■■□□□ 1
LSM6-202ENST00000502781 NOP16Q9Y3C1 178 aaKnown RBP21.27■■□□□ 1
LSM6-202ENST00000502781 TPD52L2O43399 206 aaKnown RBP21.26■□□□□ 0.99
LSM6-202ENST00000502781 GMDSO60547 372 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 ATP6V1B1P15313 513 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 FOSL1P15407 271 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 TNFRSF1AP19438 455 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 MYF6P23409 242 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 NR4A2P43354 598 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 TMEM33P57088 247 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 CARTPTQ16568 116 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 CELF2-AS1Q8N7Q2 184 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 ZNF540Q8NDQ6 660 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 ITLN1Q8WWA0 313 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 PELI1Q96FA3 418 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 MEGF10Q96KG7 1140 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 C18orf12Q96KH6 178 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 C4orf36Q96KX1 117 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 BPESC1Q9GZL8 116 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 GPR84Q9NQS5 396 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 ZNF275Q9NSD4 429 aaPredicted RBP21.26■□□□□ 0.99
LSM6-202ENST00000502781 CNOT2Q9NZN8 540 aaKnown RBP21.26■□□□□ 0.99
LSM6-202ENST00000502781 SLC22A13Q9Y226 551 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 CACNG2Q9Y698 323 aa21.26■□□□□ 0.99
LSM6-202ENST00000502781 A0A1B0GTI1 187 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 RNF223E7ERA6 249 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 F5H5P2 479 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 XPNPEP2O43895 674 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 CDC14BO60729 498 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 MAB21L1Q13394 359 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 WDR38Q5JTN6 314 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 PRSS35Q8N3Z0 413 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 PSORS1C1Q9UIG5 152 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 GTF2A1LQ9UNN4 478 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 MED13LQ71F56 2210 aa21.25■□□□□ 0.99
LSM6-202ENST00000502781 ANKRD30BLA7E2S9 258 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 PTBP3O95758 552 aaKnown RBP21.24■□□□□ 0.99
LSM6-202ENST00000502781 CCL1P22362 96 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 PSMB10P40306 273 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 CD200P41217 278 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 GATA4P43694 442 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 SRP9P49458 86 aaKnown RBP21.24■□□□□ 0.99
LSM6-202ENST00000502781 SNCBQ16143 134 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 OR2G2Q8NGZ5 317 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 ADAT1Q9BUB4 502 aaKnown RBP21.24■□□□□ 0.99
LSM6-202ENST00000502781 ISG20L2Q9H9L3 353 aaKnown RBP21.24■□□□□ 0.99
LSM6-202ENST00000502781 FKBP14Q9NWM8 211 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 RHBDD3Q9Y3P4 386 aa21.24■□□□□ 0.99
LSM6-202ENST00000502781 EFCAB10A6NFE3 127 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 J3QLW9 94 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 CST4P01036 141 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 ZNF19P17023 458 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 KIR3DL2P43630 455 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 MAP2K3P46734 347 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 OR8G1Q15617 311 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 HFEQ30201 348 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 C6orf141Q5SZD1 244 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 FTMTQ8N4E7 242 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 SPERTQ8NA61 448 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 TMEM80Q96HE8 168 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 GCM1Q9NP62 436 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 RAB26Q9ULW5 256 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 CSPG4Q6UVK1 2322 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 DHRS3O75911 302 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 ETV1P50549 477 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms