RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TRIM45Q9H8W5 580 aaPredicted RBP0.94□□□□□ -2.26
SMAD1-203ENST00000502342 ZNF302Q9NR11 478 aa0.94□□□□□ -2.26
SMAD1-203ENST00000502342 AGPAT4Q9NRZ5 378 aa0.94□□□□□ -2.26
SMAD1-203ENST00000502342 MTCH1Q9NZJ7 389 aa0.94□□□□□ -2.26
SMAD1-203ENST00000502342 SLC17A4Q9Y2C5 497 aa0.94□□□□□ -2.26
SMAD1-203ENST00000502342 PRR14LQ5THK1 2151 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 GOLGA6L4A6NEF3 574 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 C3orf84H3BNL1 204 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 GABRPO00591 440 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 DNALI1O14645 258 aaPredicted RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 SLC9A3R1O14745 358 aaPredicted RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 EIF3HO15372 352 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 AQP9O43315 295 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 CCDC22O60826 627 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 HUS1O60921 280 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 FGFR1OPO95684 399 aaKnown RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 MAS1P04201 325 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 MMP7P09237 267 aaPredicted RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 NELFEP18615 380 aaKnown RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 USF1P22415 310 aaPredicted RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 PFN2P35080 140 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 BMI1P35226 326 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 APLNRP35414 380 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 TAGLN2P37802 199 aaKnown RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 PPP1CAP62136 330 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 LIPEQ05469 1076 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 MFSD14CQ5VZR4 134 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 AMMECR1LQ6DCA0 310 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 CDH26Q8IXH8 852 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 DRAM1Q8N682 238 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 Q8NDZ9 215 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 BPIFCQ8NFQ6 507 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 OR4M2Q8NGB6 313 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 ENKURQ8TC29 256 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 ACTL9Q8TC94 416 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 DYNLL2Q96FJ2 89 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 IGF2BP2-AS1Q96M15 143 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 CSPG4P5Q96PW8 444 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 KRTAP4-1Q9BYQ7 146 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 ACTR3CQ9C0K3 210 aaPredicted RBP0.93□□□□□ -2.26
SMAD1-203ENST00000502342 DSN1Q9H410 356 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 TMEM38AQ9H6F2 299 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 CLN8Q9UBY8 286 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 COMMD3-BMI1R4GMX3 469 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 BAHCC1Q9P281 2608 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 LOXHD1Q8IVV2 1947 aa0.93□□□□□ -2.26
SMAD1-203ENST00000502342 SVILO95425 2214 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SSH2Q76I76 1423 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SDHAF1A6NFY7 115 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 C15orf65H3BRN8 121 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 M0R3G1 203 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 NME4O00746 187 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 RNF13O43567 381 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 NRASP01111 189 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 HRASP01112 189 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 KRASP01116 189 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 PGA5P0DJD9 388 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 BCKDHBP21953 392 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 GTF2E2P29084 291 aaKnown RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 PBLDP30039 288 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 TGM4P49221 684 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SLC9A3R2Q15599 337 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ZNF141Q15928 474 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ZNF660Q6AZW8 331 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 TMPPEQ6ZT21 453 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 PAGE2Q7Z2X7 111 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 HORMAD1Q86X24 394 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 CBLN2Q8IUK8 224 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SLC22A9Q8IVM8 553 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 BBS7Q8IWZ6 715 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 TTC29Q8NA56 475 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 LY6G5BQ8NDX9 201 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 OR9G4Q8NGQ1 327 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 OR52N1Q8NH53 320 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 AKR7LQ8NHP1 331 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ELMO1Q92556 727 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 RBPMSQ93062 196 aaKnown RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SLC38A4Q969I6 547 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 TPD52L3Q96J77 140 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 OR2V2Q96R30 315 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 UQCC2Q9BRT2 126 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 C20orf24Q9BUV8 137 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ZYG11BQ9C0D3 744 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 NEUROG2Q9H2A3 272 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ANKRA2Q9H9E1 313 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 NLE1Q9NVX2 485 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 DCAF16Q9NXF7 216 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 EXTL2Q9UBQ6 330 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SLC22A7Q9Y694 548 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 COL22A1Q8NFW1 1626 aaPredicted RBP0.92□□□□□ -2.26
SMAD1-203ENST00000502342 SORL1Q92673 2214 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 ATAD2BQ9ULI0 1458 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 LTBP2Q14767 1821 aa0.92□□□□□ -2.26
SMAD1-203ENST00000502342 IGLV10-54A0A075B6I4 117 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 TRBV11-1A0A0K0K1C0 115 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 C9JVG2 144 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 D6RAR5 112 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 SYNGR2O43760 224 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 WBP4O75554 376 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms