RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CSNK2BP67870 215 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-236ENST00000498808 LRRC10Q5BKY1 277 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 GLYATL3Q5SZD4 288 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 STUMQ69YW2 141 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 WDR82Q6UXN9 313 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 MBOAT2Q6ZWT7 520 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 DTX3Q8N9I9 347 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 OR56B2PQ8NGI1 322 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 ZNF799Q96GE5 643 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 TPD52L3Q96J77 140 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 GPX7Q96SL4 187 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-236ENST00000498808 FNDC11Q9BVV2 318 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 WNT10AQ9GZT5 417 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 C14orf119Q9NWQ9 140 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 SIGLEC7Q9Y286 467 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 SF3B6Q9Y3B4 125 aaKnown RBP12.65□□□□□ -0.38
HDAC6-236ENST00000498808 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 CAPN7Q9Y6W3 813 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 SACSQ9NZJ4 4579 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-236ENST00000498808 NDUFB2O95178 105 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 IFNA14P01570 189 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 CRABP1P29762 137 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 FXYD6P3P58550 94 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 RFX4Q33E94 735 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 ATPAF1Q5TC12 328 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-236ENST00000498808 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 LNX2Q8N448 690 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 OR5T2Q8NGG2 359 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
HDAC6-236ENST00000498808 DDOQ99489 341 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 NDEL1Q9GZM8 345 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 CYB5R1Q9UHQ9 305 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 B9D1Q9UPM9 204 aa12.64□□□□□ -0.39
HDAC6-236ENST00000498808 A0A1W2PRX2 142 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 ANGPTL7O43827 346 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 TXNDC12O95881 172 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 TFF1P04155 84 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 KDELR2P33947 212 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 MAGOHP61326 146 aaKnown RBP12.63□□□□□ -0.39
HDAC6-236ENST00000498808 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 DGUOKQ16854 277 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 DNM1P34Q6PK57 102 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 CROCCP2Q86T23 111 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 OR1M1Q8NGA1 313 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 OR9Q1Q8NGQ5 310 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 TSPEARQ8WU66 669 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 DUS3LQ96G46 650 aaKnown RBP12.63□□□□□ -0.39
HDAC6-236ENST00000498808 FAM46AQ96IP4 442 aaKnown RBP12.63□□□□□ -0.39
HDAC6-236ENST00000498808 MAP6Q96JE9 813 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
HDAC6-236ENST00000498808 SRA1Q9HD15 236 aaKnown RBP12.63□□□□□ -0.39
HDAC6-236ENST00000498808 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 FXYD1O00168 92 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 OTX1P32242 354 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-236ENST00000498808 GRK5P34947 590 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 SELENOWP63302 87 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 SLC35A2P78381 396 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 ERICH5Q6P6B1 374 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 VTCN1Q7Z7D3 282 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 OR2AJ1Q8NGZ0 328 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 OR8S1Q8NH09 359 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 CDCA4Q9BXL8 241 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-236ENST00000498808 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC6-236ENST00000498808 ZNF391Q9UJN7 358 aa12.62□□□□□ -0.39
HDAC6-236ENST00000498808 V9GYY5 206 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-236ENST00000498808 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 IFNW1P05000 195 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 FAHP16930 419 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-236ENST00000498808 GMFBP60983 142 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 CD83Q01151 205 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 BLMHQ13867 455 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 Q6ZS46 218 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 OR5D13Q8NGL4 314 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
HDAC6-236ENST00000498808 DNTTIP1Q9H147 329 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 WDR13Q9H1Z4 485 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 PPP1R3EQ9H7J1 279 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-236ENST00000498808 SNTG1Q9NSN8 517 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
HDAC6-236ENST00000498808 E9PQ18 207 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 H0YAE9 185 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 CDIPTO14735 213 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 PF4V1P10720 104 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 NDUFB7P17568 137 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-236ENST00000498808 GSK3BP49841 420 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms