RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 MRPL53Q96EL3 112 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 PDLIM5Q96HC4 596 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 SENP5Q96HI0 755 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 NARS2Q96I59 477 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 C7orf34Q96L11 122 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MEIS3Q99687 375 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A33Q9BSK2 321 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 HSD3B7Q9H2F3 369 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CXorf56Q9H5V9 222 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ZMAT3Q9HA38 289 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 FOLH1BQ9HBA9 442 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PLAC1Q9HBJ0 212 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 AMBNQ9NP70 447 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ACP6Q9NPH0 428 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ITM2CQ9NQX7 267 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PNPOQ9NVS9 261 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ZNF446Q9NWS9 450 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ERVK13-1Q9NX77 482 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 NKIRAS1Q9NYS0 192 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 RCC2Q9P258 522 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 MAGEC2Q9UBF1 373 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 Q9UFV3 132 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PRDM4Q9UKN5 801 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 RASD1Q9Y272 281 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 NOP58Q9Y2X3 529 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 TBL2Q9Y4P3 447 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 WDR87Q6ZQQ6 2873 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PP11 408 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GMNCA6NCL1 334 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 M0R3H8 397 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 WRBO00258 174 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GABRPO00591 440 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 BHLHE40O14503 412 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MGST3O14880 152 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GCGP01275 180 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PIGRP01833 764 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 OPN1SWP03999 348 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CRYGBP07316 175 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ANXA2P07355 339 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 TRGC1P0CF51 173 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ZNF35P13682 527 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 ADRA2CP18825 462 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PMCHP20382 165 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 C5AR1P21730 350 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MC5RP33032 325 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CSKP41240 450 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GBX2P52951 348 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 EMP1P54849 157 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 TAS2R30P59541 319 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 SPIBQ01892 262 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CXCL9Q07325 125 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 BAXQ07812 192 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MAD2L1Q13257 205 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 SLC39A6Q13433 755 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PSG5Q15238 335 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 RAB11BQ15907 218 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 HFEQ30201 348 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GAGE13Q4V321 117 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 LINC00483Q53H64 154 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 FCRLBQ6BAA4 426 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 SLC35E3Q7Z769 313 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 GALNT7Q86SF2 657 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PPP1R3BQ86XI6 285 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MCEMP1Q8IX19 187 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 C12orf45Q8N5I9 185 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 ZBTB34Q8NCN2 500 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 OR51S1Q8NGJ8 323 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 FGFBP3Q8TAT2 258 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PIGXQ8TBF5 258 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 OR5P2Q8WZ92 322 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CREB3L1Q96BA8 519 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 HVCN1Q96D96 273 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 RNF2Q99496 336 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 NDNQ99608 321 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 C11orf54Q9H0W9 315 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 CLN6Q9NWW5 311 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PAK5Q9P286 719 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 OSGIN2Q9Y236 505 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 NOP16Q9Y3C1 178 aaKnown RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 TTLL3Q9Y4R7 772 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 SELENOKQ9Y6D0 94 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 URGCP-MRPS24S4R325 110 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 DSCAML1Q8TD84 2053 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 DENND4AQ7Z401 1863 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CDK5RAP2Q96SN8 1893 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 FAM236DA0A1B0GTK5 79 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 hCG_1809904A0A1W2PP81 198 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PPE2 198 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PR64 198 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PRV1 198 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 DHRS7CA6NNS2 312 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 HMSDA8MTL9 139 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 SGK494L7N484 410 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 LDB2O43679 373 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CD5LO43866 347 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 MBD4O95243 580 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 CNIH1O95406 144 aa1.21□□□□□ -2.22
XRN1-214ENST00000498077 PAK4O96013 591 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 CYB5R3P00387 301 aaPredicted RBP1.21□□□□□ -2.22
XRN1-214ENST00000498077 VIPP01282 170 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms